TSS: Mm 28903.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK076815:0 AK169684:0 AK147946:5 BC110673:12 NM_016966:-24 uc008qps.1:-24 ENSMUST00000065793.11:-45 BC086668:45 BC027566:78 |chr=chr3 |cpg_percent=0.035...") |
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{{TSSDetail | {{TSSDetail | ||
|3PGDH= | |||
|4930479N23= | |||
|A10= | |||
|PGAD= | |||
|PGD= | |||
|PGDH= | |||
|SERA= | |||
|all_trans=AK076815:0 AK169684:0 AK147946:5 BC110673:12 NM_016966:-24 uc008qps.1:-24 ENSMUST00000065793.11:-45 BC086668:45 BC027566:78 | |all_trans=AK076815:0 AK169684:0 AK147946:5 BC110673:12 NM_016966:-24 uc008qps.1:-24 ENSMUST00000065793.11:-45 BC086668:45 BC027566:78 | ||
|chr=chr3 | |chr=chr3 | ||
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|distance_to_tss=36 | |distance_to_tss=36 | ||
|end=98339945 | |end=98339945 | ||
|end_of_center_position=98339934 | |||
|entrez_id=236539 | |entrez_id=236539 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
|gene_alias=3-PGDH | |gene_alias=3-PGDH | ||
|gene_description=3-phosphoglycerate dehydrogenase | |gene_description=3-phosphoglycerate dehydrogenase | ||
|gene_id=236539 | |gene_id=236539 | ||
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|species=mouse | |species=mouse | ||
|start=98339921 | |start=98339921 | ||
|start_of_center_position=98339933 | |||
|strand=- | |strand=- | ||
|transcript_name=AK076815 AK169684 | |transcript_name=AK076815 AK169684 | ||
Revision as of 20:28, 10 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 36 |
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| Nearest PromoterID: | NM_016966 |
| Entrez ID: | 236539 |
| Nearest Unigene: | Mm.16898 |
| Nearest Refseq: | NM_016966 |
| Nearest Ensembl: | ENSMUSG00000053398 |
| Gene Name: | 3-phosphoglycerate dehydrogenase |
| Gene Alias: | 3-PGDH |
| Gene Description: | 3-phosphoglycerate dehydrogenase |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.