TSS: Hg 3086.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr1 |cpg_percent=0.005 |distance= |distance_to_tss=7407 |end=61089717 |entrez_id=4774 |gc_percent=0.313433 |gene_alias=CTF|NF-I/A|NF1-A|NFI-A|NFI-L |gene_des...") |
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{{TSSDetail | {{TSSDetail | ||
|NF-I/A= | |||
|NF1-A= | |||
|NFI-A= | |||
|NFI-L= | |||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 5: | Line 9: | ||
|distance_to_tss=7407 | |distance_to_tss=7407 | ||
|end=61089717 | |end=61089717 | ||
|end_of_center_position=61089716 | |||
|entrez_id=4774 | |entrez_id=4774 | ||
|gc_percent=0.313433 | |gc_percent=0.313433 | ||
|gene_alias=CTF | |gene_alias=CTF | ||
|gene_description=nuclear factor I A | |gene_description=nuclear factor I A | ||
|gene_name=NFIA | |gene_name=NFIA | ||
| Line 18: | Line 23: | ||
|species=human | |species=human | ||
|start=61089713 | |start=61089713 | ||
|start_of_center_position=61089715 | |||
|strand=+ | |strand=+ | ||
|tata_box="74(GTTTTTAAAGAA,+,0.00)" | |tata_box="74(GTTTTTAAAGAA,+,0.00)" | ||
Revision as of 01:32, 11 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 7407 |
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| Nearest PromoterID: | NM_001134673 |
| Entrez ID: | 4774 |
| Nearest Unigene: | Hs.740757 |
| Nearest Refseq: | NM_005595 |
| Nearest Ensembl: | ENSG00000162599 |
| Gene Name: | NFIA |
| Gene Alias: | CTF |
| Gene Description: | nuclear factor I A |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.313433 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "74(GTTTTTAAAGAA,+,0.00)" |