TSS: Hg 100090.1: Difference between revisions

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Line 7: Line 7:
|distance_to_tss=144214
|distance_to_tss=144214
|end=15697224
|end=15697224
|end_of_center_position=15697221
|entrez_id=203238
|entrez_id=203238
|gc_percent=0.447761
|gc_percent=0.447761
|gene_alias=C9orf93|bA536D16.1|bA778P13.1
|gene_alias=C9orf93
|gene_description=coiled-coil domain containing 171
|gene_description=coiled-coil domain containing 171
|gene_name=CCDC171
|gene_name=CCDC171
Line 20: Line 21:
|species=human
|species=human
|start=15697217
|start=15697217
|start_of_center_position=15697220
|strand=-
|strand=-
|tata_box="-88(TAGCTTAAAAGG,-,0.00),-86(GCTTAAAAGGTC,+,0.00)"
|tata_box="-88(TAGCTTAAAAGG,-,0.00),-86(GCTTAAAAGGTC,+,0.00)"

Revision as of 05:04, 11 May 2019

Basic information about the TSS

TSS ID:hg_100090.1
Species:human
Chr:chr9
Start:15697217
End:15697224
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:
Distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:CCDC171
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation

Distance to TSS:144214
Nearest PromoterID:NM_001348002
Entrez ID:203238
Nearest Unigene:Hs.17267
Nearest Refseq:NM_173550
Nearest Ensembl:ENSG00000164989
Gene Name:CCDC171
Gene Alias:C9orf93
Gene Description:coiled-coil domain containing 171
Gene Type:protein-coding
CpG%:0.005
GC%:0.447761
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-88(TAGCTTAAAAGG,-,0.00),-86(GCTTAAAAGGTC,+,0.00)"



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