TSS: Hg 243219.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=LG052687:219 |chr=chr8 |cpg_percent=0.135 |distance=219 |distance_to_tss=74 |end=61714569 |entrez_id=444 |gc_percent=0.761194 |gene_alias=AAH|BAH|CASQ2B...") |
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{{TSSDetail | {{TSSDetail | ||
|BAH= | |||
|CASQ2BP1= | |||
|FDLAB= | |||
|HAAH= | |||
|JCTN= | |||
|all_trans=LG052687:219 | |all_trans=LG052687:219 | ||
|chr=chr8 | |chr=chr8 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=74 | |distance_to_tss=74 | ||
|end=61714569 | |end=61714569 | ||
|end_of_center_position=19380207 | |||
|entrez_id=444 | |entrez_id=444 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
|gene_alias=AAH | |gene_alias=AAH | ||
|gene_description=aspartate beta-hydroxylase | |gene_description=aspartate beta-hydroxylase | ||
|gene_name=ASPH | |gene_name=ASPH | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|junctin= | |||
|nearest_ensembl=ENSG00000198363 | |nearest_ensembl=ENSG00000198363 | ||
|nearest_promoter_id=NM_001164755 | |nearest_promoter_id=NM_001164755 | ||
| Line 19: | Line 26: | ||
|species=human | |species=human | ||
|start=61714562 | |start=61714562 | ||
|start_of_center_position=19380206 | |||
|strand=+ | |strand=+ | ||
|transcript_name=LG052687 | |transcript_name=LG052687 | ||
Revision as of 05:22, 11 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 74 |
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| Nearest PromoterID: | NM_001164755 |
| Entrez ID: | 444 |
| Nearest Unigene: | Hs.332422 |
| Nearest Refseq: | NM_004318 |
| Nearest Ensembl: | ENSG00000198363 |
| Gene Name: | ASPH |
| Gene Alias: | AAH |
| Gene Description: | aspartate beta-hydroxylase |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |