TSS: Hg 100311.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| Line 5: | Line 5: | ||
|distance_to_tss=195259 | |distance_to_tss=195259 | ||
|end=26261938 | |end=26261938 | ||
|end_of_center_position=26261935 | |||
|entrez_id=100506422 | |entrez_id=100506422 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| Line 18: | Line 19: | ||
|species=human | |species=human | ||
|start=26261930 | |start=26261930 | ||
|start_of_center_position=26261934 | |||
|strand=- | |strand=- | ||
|tata_box="-34(CTCCTTAAAAAC,-,0.00),-32(CCTTAAAAACCC,+,0.00)" | |tata_box="-34(CTCCTTAAAAAC,-,0.00),-32(CCTTAAAAACCC,+,0.00)" | ||
Revision as of 05:44, 11 May 2019
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 195259 |
|---|---|
| Nearest PromoterID: | NM_001004352 |
| Entrez ID: | 100506422 |
| Nearest Unigene: | Hs.533221 |
| Nearest Refseq: | NM_001004352 |
| Nearest Ensembl: | |
| Gene Name: | LOC100506422 |
| Gene Alias: | - |
| Gene Description: | putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-34(CTCCTTAAAAAC,-,0.00),-32(CCTTAAAAACCC,+,0.00)" |