TSS: Hg 101458.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
Line 5: | Line 5: | ||
|distance_to_tss=-272 | |distance_to_tss=-272 | ||
|end=92947053 | |end=92947053 | ||
|end_of_center_position=92947048 | |||
|entrez_id=89846 | |entrez_id=89846 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
Line 18: | Line 19: | ||
|species=human | |species=human | ||
|start=92947041 | |start=92947041 | ||
|start_of_center_position=92947047 | |||
|strand=- | |strand=- | ||
|tata_box="-57(GCTTAAAGAGGT,+,0.00)" | |tata_box="-57(GCTTAAAGAGGT,+,0.00)" |
Revision as of 09:23, 11 May 2019
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | -272 |
---|---|
Nearest PromoterID: | NM_001083536 |
Entrez ID: | 89846 |
Nearest Unigene: | Hs.411081 |
Nearest Refseq: | NM_033086 |
Nearest Ensembl: | ENSG00000127084 |
Gene Name: | FGD3 |
Gene Alias: | ZFYVE5 |
Gene Description: | "FYVE, RhoGEF and PH domain containing 3" |
Gene Type: | protein-coding |
CpG%: | 0.025 |
GC%: | 0.517413 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-57(GCTTAAAGAGGT,+,0.00)" |