TSS: Hg 101891.1: Difference between revisions

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Line 6: Line 6:
|distance_to_tss=9133
|distance_to_tss=9133
|end=109408656
|end=109408656
|end_of_center_position=109408650
|entrez_id=5774
|entrez_id=5774
|gc_percent=0.522388
|gc_percent=0.522388
|gene_alias=PTP-H1|PTPH1
|gene_alias=PTP-H1
|gene_description="protein tyrosine phosphatase, non-receptor type 3"
|gene_description="protein tyrosine phosphatase, non-receptor type 3"
|gene_name=PTPN3
|gene_name=PTPN3
Line 19: Line 20:
|species=human
|species=human
|start=109408643
|start=109408643
|start_of_center_position=109408649
|strand=-
|strand=-
|tata_box="-36(GCGTTTTTAAGG,-,0.00),-34(GTTTTTAAGGAG,+,0.00)"
|tata_box="-36(GCGTTTTTAAGG,-,0.00),-34(GTTTTTAAGGAG,+,0.00)"

Revision as of 11:01, 11 May 2019

Basic information about the TSS

TSS ID:hg_101891.1
Species:human
Chr:chr9
Start:109408643
End:109408656
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:
Distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:PTPN3
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation

Distance to TSS:9133
Nearest PromoterID:NR_026918
Entrez ID:5774
Nearest Unigene:Hs.436429
Nearest Refseq:NM_002829
Nearest Ensembl:ENSG00000070159
Gene Name:PTPN3
Gene Alias:PTP-H1
Gene Description:"protein tyrosine phosphatase, non-receptor type 3"
Gene Type:protein-coding
CpG%:0.02
GC%:0.522388
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-36(GCGTTTTTAAGG,-,0.00),-34(GTTTTTAAGGAG,+,0.00)"



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