TSS: Hg 102074.1: Difference between revisions

Revision as of 11:32, 11 May 2019

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 16)

Gene and protein annotation

Transcript_name:	ENST00000497712.6 ENST00000481146.6 ENST00000374234.1 ENST00000476599.2 NM_021218 uc064vcp.1 uc064vcr.1 uc064vcs.1 uc064vct.1 BC014881 AK000637 BC065210 AF161409 AF161411 AK310007
Distance:	0
GeneID:	58493
HGNC/MGI_ID:	HGNC:24994
UniProt_ID:	Q5VWJ6 Q9NRY2

Gene_name:	INTS3 and NABP interacting protein
Gene_symbol:	INIP
Gene_synonyms:	HSPC043 MISE SOSS-C hSSBIP1
Gene_source:	HGNC:24994

TATA-Box annotation

Distance to TSS:	65
Nearest PromoterID:	NM_001329590
Entrez ID:	58493
Nearest Unigene:	Hs.658575
Nearest Refseq:	NM_021218
Nearest Ensembl:	ENSG00000148153
Gene Name:	INTS3 and NABP interacting protein
Gene Alias:	C9orf80
Gene Description:	INTS3 and NABP interacting protein
Gene Type:	protein-coding
CpG%:	0.11
GC%:	0.686567
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):	"43(CCCTTTAAGAGC,+,0.00),43(CCCTTTAAGAGC,-,0.00),44(CCTTTAAGAGCA,+,0.00)"

TSS expression

Expression data not found.

@@ Line 10: / Line 10: @@
 |distance_to_tss=65
 |end=112718145
+|end_of_center_position=112718085
 |entrez_id=58493
 |gc_percent=0.686567
-|gene_alias=C9orf80|HSPC043|MISE|SOSSC|SSBIP1|hSSBIP1
+|gene_alias=C9orf80
 |gene_description=INTS3 and NABP interacting protein
 |gene_id=58493
@@ Line 29: / Line 30: @@
 |species=human
 |start=112718023
+|start_of_center_position=112718084
 |strand=-
 |tata_box="43(CCCTTTAAGAGC,+,0.00),43(CCCTTTAAGAGC,-,0.00),44(CCTTTAAGAGCA,+,0.00)"