TSS: Hg 102156.1: Difference between revisions

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|distance_to_tss=2483
|distance_to_tss=2483
|end=114385502
|end=114385502
|end_of_center_position=114385480
|entrez_id=80709
|entrez_id=80709
|gc_percent=0.522388
|gc_percent=0.522388
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|species=human
|species=human
|start=114385457
|start=114385457
|start_of_center_position=114385479
|strand=-
|strand=-
|tata_box="-41(CCCTTTAAAAAG,+,0.00),-41(CCCTTTAAAAAG,-,0.00),-39(CTTTAAAAAGTC,+,0.00)"
|tata_box="-41(CCCTTTAAAAAG,+,0.00),-41(CCCTTTAAAAAG,-,0.00),-39(CTTTAAAAAGTC,+,0.00)"

Revision as of 11:52, 11 May 2019

Basic information about the TSS

TSS ID:hg_102156.1
Species:human
Chr:chr9
Start:114385457
End:114385502
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:
Distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:AKNA
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation

Distance to TSS:2483
Nearest PromoterID:NM_001317950
Entrez ID:80709
Nearest Unigene:Hs.494895
Nearest Refseq:NM_030767
Nearest Ensembl:ENSG00000106948
Gene Name:AKNA
Gene Alias:-
Gene Description:AT-hook transcription factor
Gene Type:protein-coding
CpG%:0.01
GC%:0.522388
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-41(CCCTTTAAAAAG,+,0.00),-41(CCCTTTAAAAAG,-,0.00),-39(CTTTAAAAAGTC,+,0.00)"



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