TSS: Mm 33971.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK136342:447 |chr=chr4 |cpg_percent=0 |distance=447 |distance_to_tss=20352 |end=137614543 |entrez_id=170707 |gc_percent=0.462687 |gene_alias=2810449C13R...") |
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{{TSSDetail | {{TSSDetail | ||
|AI115503= | |||
|BC021769= | |||
|D330022K21Rik= | |||
|Usp31= | |||
|all_trans=AK136342:447 | |all_trans=AK136342:447 | ||
|chr=chr4 | |chr=chr4 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=20352 | |distance_to_tss=20352 | ||
|end=137614543 | |end=137614543 | ||
|end_of_center_position=137614542 | |||
|entrez_id=170707 | |entrez_id=170707 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
|gene_alias=2810449C13Rik | |gene_alias=2810449C13Rik | ||
|gene_description=ubiquitin specific peptidase 48 | |gene_description=ubiquitin specific peptidase 48 | ||
|gene_id=654493 | |gene_id=654493 | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=137614539 | |start=137614539 | ||
|start_of_center_position=137614541 | |||
|strand=+ | |strand=+ | ||
|tata_box="33(GTCTTTTTAAAG,-,0.00),35(CTTTTTAAAGAT,+,0.00)" | |tata_box="33(GTCTTTTTAAAG,-,0.00),35(CTTTTTAAAGAT,+,0.00)" | ||
Revision as of 12:54, 11 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 20352 |
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| Nearest PromoterID: | NM_130879 |
| Entrez ID: | 170707 |
| Nearest Unigene: | Mm.218478 |
| Nearest Refseq: | NM_130879 |
| Nearest Ensembl: | ENSMUSG00000043411 |
| Gene Name: | Riken cDNA 8030494B02 gene |
| Gene Alias: | 2810449C13Rik |
| Gene Description: | ubiquitin specific peptidase 48 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "33(GTCTTTTTAAAG,-,0.00),35(CTTTTTAAAGAT,+,0.00)" |
TSS expression
Expression data not found.