TSS: Hg 102899.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| Line 5: | Line 5: | ||
|distance_to_tss=-24648 | |distance_to_tss=-24648 | ||
|end=132557959 | |end=132557959 | ||
|end_of_center_position=132557958 | |||
|entrez_id=56751 | |entrez_id=56751 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| Line 18: | Line 19: | ||
|species=human | |species=human | ||
|start=132557956 | |start=132557956 | ||
|start_of_center_position=132557957 | |||
|strand=- | |strand=- | ||
|tata_box="0(CACTCTAAAAGA,-,0.00),43(GCTTATAAACTC,+,0.00)" | |tata_box="0(CACTCTAAAAGA,-,0.00),43(GCTTATAAACTC,+,0.00)" | ||
Revision as of 14:35, 11 May 2019
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -24648 |
|---|---|
| Nearest PromoterID: | NM_020064 |
| Entrez ID: | 56751 |
| Nearest Unigene: | Hs.283809 |
| Nearest Refseq: | NM_020064 |
| Nearest Ensembl: | ENSG00000125492 |
| Gene Name: | BARHL1 |
| Gene Alias: | - |
| Gene Description: | BarH like homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "0(CACTCTAAAAGA,-,0.00),43(GCTTATAAACTC,+,0.00)" |