TSS: Hg 16893.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr1 |cpg_percent=0.025 |distance= |distance_to_tss=52275 |end=204307661 |entrez_id=22874 |gc_percent=0.537313 |gene_alias=PEPP-3|PEPP3 |gene_description=plec...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|PEPP3= | |||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 5: | Line 6: | ||
|distance_to_tss=52275 | |distance_to_tss=52275 | ||
|end=204307661 | |end=204307661 | ||
|end_of_center_position=204307655 | |||
|entrez_id=22874 | |entrez_id=22874 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
|gene_alias=PEPP-3 | |gene_alias=PEPP-3 | ||
|gene_description=pleckstrin homology domain containing A6 | |gene_description=pleckstrin homology domain containing A6 | ||
|gene_name=PLEKHA6 | |gene_name=PLEKHA6 | ||
| Line 18: | Line 20: | ||
|species=human | |species=human | ||
|start=204307647 | |start=204307647 | ||
|start_of_center_position=204307654 | |||
|strand=- | |strand=- | ||
|tata_box="29(GTTTATATAGGA,+,0.00)" | |tata_box="29(GTTTATATAGGA,+,0.00)" | ||
Revision as of 16:49, 11 May 2019
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 52275 |
|---|---|
| Nearest PromoterID: | NM_014935 |
| Entrez ID: | 22874 |
| Nearest Unigene: | Hs.253146 |
| Nearest Refseq: | NM_014935 |
| Nearest Ensembl: | ENSG00000143850 |
| Gene Name: | PLEKHA6 |
| Gene Alias: | PEPP-3 |
| Gene Description: | pleckstrin homology domain containing A6 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "29(GTTTATATAGGA,+,0.00)" |