TSS: Mm 94883.1: Difference between revisions

Revision as of 22:29, 11 May 2019

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 5)

Gene and protein annotation

Transcript_name:	ENSMUST00000136830.1 ENSMUST00000143471.1 ENSMUST00000109509.7 AK168538 AK020981 AK011903 AK017431 AK008605 AK076017 AK018018 AK011752 BC066181 BC032876
Distance:	0
GeneID:	67030
HGNC/MGI_ID:	MGI:1914280
UniProt_ID:	D3Z6C0 Q9CR14

Gene_name:	"Fanconi anemia, complementation group L"
Gene_symbol:	Fancl
Gene_synonyms:	2010322C19Rik B230118H11Rik Phf9 Pog gcd
Gene_source:	MGI:1914280

TATA-Box annotation

Distance to TSS:	119
Nearest PromoterID:	NR_102382
Entrez ID:	67030
Nearest Unigene:	Mm.18875
Nearest Refseq:	NM_025923
Nearest Ensembl:	ENSMUSG00000004018
Gene Name:	"Fanconi anemia, complementation group L"
Gene Alias:	2010322C19Rik
Gene Description:	"Fanconi anemia, complementation group L"
Gene Type:	protein-coding
CpG%:	0.07
GC%:	0.572139
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
+|AW554273=
+|B230118H11Rik=
+|Phf9=
+|Pog=
 |all_trans=ENSMUST00000136830.1:0 ENSMUST00000143471.1:0 ENSMUST00000109509.7:0 AK168538:0 AK020981:0 AK011903:0 AK017431:0 AK008605:0 AK076017:0 AK018018:0 AK011752:0 BC066181:0 BC032876:0 AK011520:-15 NM_025923:-111 NR_102382:-111 NM_001277273:-111 uc007igd.1:-111 uc011xsj.2:-111 uc007ige.2:-111 uc033fud.1:-111 AF513619:-111
 |chr=chr11
@@ Line 6: / Line 10: @@
 |distance_to_tss=119
 |end=26387211
+|end_of_center_position=26387203
 |entrez_id=67030
 |gc_percent=0.572139
-|gene_alias=2010322C19Rik|AW554273|B230118H11Rik|Phf9|Pog|gcd
+|gcd=
+|gene_alias=2010322C19Rik
 |gene_description="Fanconi anemia, complementation group L"
 |gene_id=67030
@@ Line 24: / Line 30: @@
 |species=mouse
 |start=26387194
+|start_of_center_position=26387202
 |strand=+
 |transcript_name=ENSMUST00000136830.1 ENSMUST00000143471.1 ENSMUST00000109509.7 AK168538 AK020981 AK011903 AK017431 AK008605 AK076017 AK018018 AK011752 BC066181 BC032876