TSS: Mm 102373.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AY148487:-296 |chr=chr11 |cpg_percent=0.015 |distance=-296 |distance_to_tss=923 |end=58612582 |entrez_id=78354 |gc_percent=0.427861 |gene_alias=Ep1 |gen...") |
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|distance_to_tss=923 | |distance_to_tss=923 | ||
|end=58612582 | |end=58612582 | ||
|end_of_center_position=58612570 | |||
|entrez_id=78354 | |entrez_id=78354 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
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|species=mouse | |species=mouse | ||
|start=58612556 | |start=58612556 | ||
|start_of_center_position=58612569 | |||
|strand=- | |strand=- | ||
|tata_box="-90(CCCTTTAAATGA,-,0.00),11(CCTCTTATAGCT,+,0.00)" | |tata_box="-90(CCCTTTAAATGA,-,0.00),11(CCTCTTATAGCT,+,0.00)" | ||
Revision as of 01:40, 12 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 923 |
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| Nearest PromoterID: | NM_144544 |
| Entrez ID: | 78354 |
| Nearest Unigene: | Mm.58038 |
| Nearest Refseq: | NM_144544 |
| Nearest Ensembl: | ENSMUSG00000037145 |
| Gene Name: | RIKEN cDNA 2210407C18 gene |
| Gene Alias: | Ep1 |
| Gene Description: | RIKEN cDNA 2210407C18 gene |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-90(CCCTTTAAATGA,-,0.00),11(CCTCTTATAGCT,+,0.00)" |
TSS expression
Expression data not found.