TSS: Hg 104510.1: Difference between revisions

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Line 6: Line 6:
|distance_to_tss=69
|distance_to_tss=69
|end=28743722
|end=28743722
|end_of_center_position=28743719
|entrez_id=101929218
|entrez_id=101929218
|gc_percent=0.547264
|gc_percent=0.547264
Line 19: Line 20:
|species=human
|species=human
|start=28743715
|start=28743715
|start_of_center_position=28743718
|strand=+
|strand=+
|tata_box="-17(CCCTCTTAGAGG,-,0.00),-16(CCTCTTAGAGGT,+,0.00)"
|tata_box="-17(CCCTCTTAGAGG,-,0.00),-16(CCTCTTAGAGGT,+,0.00)"

Revision as of 01:42, 12 May 2019

Basic information about the TSS

TSS ID:hg_104510.1
Species:human
Chr:chr10
Start:28743715
End:28743722
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:AK058127
Distance:13
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:LINC01517
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation

Distance to TSS:69
Nearest PromoterID:NR_120652
Entrez ID:101929218
Nearest Unigene:Hs.224866
Nearest Refseq:NR_120652
Nearest Ensembl:
Gene Name:LINC01517
Gene Alias:-
Gene Description:long intergenic non-protein coding RNA 1517
Gene Type:ncRNA
CpG%:0.015
GC%:0.547264
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-17(CCCTCTTAGAGG,-,0.00),-16(CCTCTTAGAGGT,+,0.00)"



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