TSS: Mm 43084.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000143722.7:0 ENSMUST00000135667.7:211 |chr=chr5 |cpg_percent=0.02 |distance=0 |distance_to_tss=3465 |end=124450173 |entrez_id=67956 |gc_percen...") |
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{{TSSDetail | {{TSSDetail | ||
|AA617402= | |||
|AW536475= | |||
|PR-SET7= | |||
|PR/SET07= | |||
|Setd8= | |||
|all_trans=ENSMUST00000143722.7:0 ENSMUST00000135667.7:211 | |all_trans=ENSMUST00000143722.7:0 ENSMUST00000135667.7:211 | ||
|chr=chr5 | |chr=chr5 | ||
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|distance_to_tss=3465 | |distance_to_tss=3465 | ||
|end=124450173 | |end=124450173 | ||
|end_of_center_position=124450169 | |||
|entrez_id=67956 | |entrez_id=67956 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
|gene_alias=2410195B05Rik | |gene_alias=2410195B05Rik | ||
|gene_description=lysine methyltransferase 5A | |gene_description=lysine methyltransferase 5A | ||
|gene_id=67956 | |gene_id=67956 | ||
| Line 24: | Line 30: | ||
|species=mouse | |species=mouse | ||
|start=124450164 | |start=124450164 | ||
|start_of_center_position=124450168 | |||
|strand=+ | |strand=+ | ||
|tata_box="-62(TACTTTAAAAAG,-,0.00)" | |tata_box="-62(TACTTTAAAAAG,-,0.00)" | ||
Revision as of 03:48, 12 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 3465 |
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| Nearest PromoterID: | NM_001310727 |
| Entrez ID: | 67956 |
| Nearest Unigene: | Mm.137966 |
| Nearest Refseq: | NM_030241 |
| Nearest Ensembl: | ENSMUSG00000049327 |
| Gene Name: | SET domain containing (lysine methyltransferase) 8 |
| Gene Alias: | 2410195B05Rik |
| Gene Description: | lysine methyltransferase 5A |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-62(TACTTTAAAAAG,-,0.00)" |
TSS expression
Expression data not found.