TSS: Hg 105574.1: Difference between revisions

Revision as of 05:16, 12 May 2019

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 16)

Gene and protein annotation

Transcript_name:	ENST00000624354.3 ENST00000211998.8 ENST00000372755.7 ENST00000478896.2 NM_014000 NM_003373 uc010qky.2 uc001jwd.4 uc001jwe.4 uc057uer.1 AK304823 EU794673 AK300280 AK296509 BC099919 BC039174
Distance:	0
GeneID:	7414
HGNC/MGI_ID:	HGNC:12665
UniProt_ID:	A0A024QZN4 A0A096LPE1 B4DKC9 B4DTM7 B4E3Q9 P18206 V9HWK2

TATA-Box annotation

Distance to TSS:	8
Nearest PromoterID:	NM_014000
Entrez ID:	7414
Nearest Unigene:	Hs.643896
Nearest Refseq:	NM_003373
Nearest Ensembl:	ENSG00000035403
Gene Name:	vinculin
Gene Alias:	CMD1W
Gene Description:	vinculin
Gene Type:	protein-coding
CpG%:	0.13
GC%:	0.701493
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 10: / Line 10: @@
 |distance_to_tss=8
 |end=73998139
+|end_of_center_position=73998123
 |entrez_id=7414
 |gc_percent=0.701493
-|gene_alias=CMD1W|CMH15|HEL114|MV|MVCL
+|gene_alias=CMD1W
 |gene_description=vinculin
 |gene_id=7414
@@ Line 28: / Line 29: @@
 |species=human
 |start=73998105
+|start_of_center_position=73998122
 |strand=+
 |transcript_name=ENST00000624354.3 ENST00000211998.8 ENST00000372755.7 ENST00000478896.2 NM_014000 NM_003373 uc010qky.2 uc001jwd.4 uc001jwe.4 uc057uer.1 AK304823 EU794673 AK300280 AK296509 BC099919 BC039174