TSS: Hg 183700.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=KJ895191:3 CU692252:4 HQ447971:4 KJ899952:4 AF332356:-15 AK291440:-52 BC100923:-69 BC100924:-69 BC100925:-69 BC100926:-69 ENST00000494921.1:-77 uc061vqx...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|DUE-B= | |||
|DUEB= | |||
|HARS2= | |||
|all_trans=KJ895191:3 CU692252:4 HQ447971:4 KJ899952:4 AF332356:-15 AK291440:-52 BC100923:-69 BC100924:-69 BC100925:-69 BC100926:-69 ENST00000494921.1:-77 uc061vqx.1:-77 AK074304:-77 BC045167:-109 ENST00000377452.3:-148 NM_001318043:-148 NM_080820:-148 uc002wrf.5:-148 | |all_trans=KJ895191:3 CU692252:4 HQ447971:4 KJ899952:4 AF332356:-15 AK291440:-52 BC100923:-69 BC100924:-69 BC100925:-69 BC100926:-69 ENST00000494921.1:-77 uc061vqx.1:-77 AK074304:-77 BC045167:-109 ENST00000377452.3:-148 NM_001318043:-148 NM_080820:-148 uc002wrf.5:-148 | ||
|chr=chr20 | |chr=chr20 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=161 | |distance_to_tss=161 | ||
|end=18588068 | |end=18588068 | ||
|end_of_center_position=18588055 | |||
|entrez_id=92675 | |entrez_id=92675 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
|gene_alias=C20orf88 | |gene_alias=C20orf88 | ||
|gene_description=D-tyrosyl-tRNA deacylase 1 | |gene_description=D-tyrosyl-tRNA deacylase 1 | ||
|gene_name=DTD1 | |gene_name=DTD1 | ||
| Line 17: | Line 21: | ||
|nearest_unigene=Hs.659442 | |nearest_unigene=Hs.659442 | ||
|num_trans=18 | |num_trans=18 | ||
|pqn-68= | |||
|species=human | |species=human | ||
|start=18588040 | |start=18588040 | ||
|start_of_center_position=18588054 | |||
|strand=+ | |strand=+ | ||
|transcript_name=KJ895191 | |transcript_name=KJ895191 | ||
Revision as of 08:37, 12 May 2019
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 161 |
|---|---|
| Nearest PromoterID: | NM_001318043 |
| Entrez ID: | 92675 |
| Nearest Unigene: | Hs.659442 |
| Nearest Refseq: | NM_080820 |
| Nearest Ensembl: | ENSG00000125821 |
| Gene Name: | DTD1 |
| Gene Alias: | C20orf88 |
| Gene Description: | D-tyrosyl-tRNA deacylase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |