TSS: Mm 104927.1: Difference between revisions

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000105049.1:0 NM_001099774:0 uc007ljz.2:0 AK020698:0 |chr=chr11 |cpg_percent=0.03 |distance=0 |distance_to_tss=-1 |end=99993997 |entrez_id=7791...")
 
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|distance_to_tss=-1
|distance_to_tss=-1
|end=99993997
|end=99993997
|end_of_center_position=99993995
|entrez_id=77914
|entrez_id=77914
|gc_percent=0.577114
|gc_percent=0.577114
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|species=mouse
|species=mouse
|start=99993992
|start=99993992
|start_of_center_position=99993994
|strand=-
|strand=-
|tata_box="-33(GGATATAAAAGC,-,0.00)"
|tata_box="-33(GGATATAAAAGC,-,0.00)"

Revision as of 09:24, 12 May 2019

Basic information about the TSS


TSS ID:mm_104927.1
Species:mouse
Chr:chr11
Start:99993992
End:99993997
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation


Transcript_name:ENSMUST00000105049.1 NM_001099774 uc007ljz.2 AK020698
Distance:0
GeneID:77914
HGNC/MGI_ID:MGI:1925164
UniProt_ID:A2A5X6
Gene_name:keratin associated protein 17-1
Gene_symbol:Krtap17-1
Gene_synonyms:A030006P16Rik
Gene_source:MGI:1925164



TATA-Box annotation


Distance to TSS:-1
Nearest PromoterID:NM_001099774
Entrez ID:77914
Nearest Unigene:Mm.293692
Nearest Refseq:NM_001099774
Nearest Ensembl:ENSMUSG00000078252
Gene Name:keratin associated protein 17-1
Gene Alias:A030006P16Rik
Gene Description:keratin associated protein 17-1
Gene Type:protein-coding
CpG%:0.03
GC%:0.577114
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-33(GGATATAAAAGC,-,0.00)"



TSS expression

Expression data not found.