TSS: Hg 184599.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK303860:0 ENST00000619850.1:2 uc061wzh.1:2 BC001068:2 BC006553:2 BC080188:2 BC063661:3 BC053683:5 ENST00000217429.8:-94 ENST00000619304.4:-94 NM_030919...") |
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{{TSSDetail | {{TSSDetail | ||
|CHICA= | |||
|all_trans=AK303860:0 ENST00000619850.1:2 uc061wzh.1:2 BC001068:2 BC006553:2 BC080188:2 BC063661:3 BC053683:5 ENST00000217429.8:-94 ENST00000619304.4:-94 NM_030919:-94 uc002xjg.5:-94 uc061wzg.1:-94 AK055793:-94 AL832274:450 | |all_trans=AK303860:0 ENST00000619850.1:2 uc061wzh.1:2 BC001068:2 BC006553:2 BC080188:2 BC063661:3 BC053683:5 ENST00000217429.8:-94 ENST00000619304.4:-94 NM_030919:-94 uc002xjg.5:-94 uc061wzg.1:-94 AK055793:-94 AL832274:450 | ||
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|dJ616B8.3= | |||
|distance=0 | |distance=0 | ||
|distance_to_tss=103 | |distance_to_tss=103 | ||
|end=38926424 | |end=38926424 | ||
|end_of_center_position=38926415 | |||
|entrez_id=81610 | |entrez_id=81610 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
|gene_alias=C20orf129 | |gene_alias=C20orf129 | ||
|gene_description=family with sequence similarity 83 member D | |gene_description=family with sequence similarity 83 member D | ||
|gene_id=81610 | |gene_id=81610 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=38926405 | |start=38926405 | ||
|start_of_center_position=38926414 | |||
|strand=+ | |strand=+ | ||
|tata_box="-33(GCCTATAAAGCG,+,0.00)" | |tata_box="-33(GCCTATAAAGCG,+,0.00)" | ||
Revision as of 10:47, 12 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 103 |
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| Nearest PromoterID: | NM_030919 |
| Entrez ID: | 81610 |
| Nearest Unigene: | Hs.726442 |
| Nearest Refseq: | NM_030919 |
| Nearest Ensembl: | ENSG00000101447 |
| Gene Name: | family with sequence similarity 83 member D |
| Gene Alias: | C20orf129 |
| Gene Description: | family with sequence similarity 83 member D |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-33(GCCTATAAAGCG,+,0.00)" |
TSS expression
Expression data not found.