TSS: Hg 238110.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr20 |cpg_percent=0.045 |distance= |distance_to_tss=1442 |end=3203258 |entrez_id=65992 |gc_percent=0.686567 |gene_alias=C20orf116|UFBP1|dJ1187M17.3 |gene_des...") |
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{{TSSDetail | {{TSSDetail | ||
|UFBP1= | |||
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|dJ1187M17.3= | |||
|distance= | |distance= | ||
|distance_to_tss=1442 | |distance_to_tss=1442 | ||
|end=3203258 | |end=3203258 | ||
|end_of_center_position=57489126 | |||
|entrez_id=65992 | |entrez_id=65992 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
|gene_alias=C20orf116 | |gene_alias=C20orf116 | ||
|gene_description=DDRGK domain containing 1 | |gene_description=DDRGK domain containing 1 | ||
|gene_name=DDRGK1 | |gene_name=DDRGK1 | ||
| Line 18: | Line 21: | ||
|species=human | |species=human | ||
|start=3203251 | |start=3203251 | ||
|start_of_center_position=57489125 | |||
|strand=- | |strand=- | ||
|tata_box="88(GGGGATAAAAGG,-,0.00)" | |tata_box="88(GGGGATAAAAGG,-,0.00)" | ||
Revision as of 13:08, 12 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1442 |
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| Nearest PromoterID: | NM_023935 |
| Entrez ID: | 65992 |
| Nearest Unigene: | Hs.471975 |
| Nearest Refseq: | NM_023935 |
| Nearest Ensembl: | ENSG00000198171 |
| Gene Name: | DDRGK1 |
| Gene Alias: | C20orf116 |
| Gene Description: | DDRGK domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "88(GGGGATAAAAGG,-,0.00)" |