TSS: Hg 189985.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|ABETA= | |||
|ABPP= | |||
|AD1= | |||
|APPI= | |||
|CTFgamma= | |||
|CVAP= | |||
|PN-II= | |||
|PN2= | |||
|all_trans=BC018937:-53 ENST00000415997.1:54 uc061zht.1:54 ENST00000491395.5:68 uc061zhu.1:68 | |all_trans=BC018937:-53 ENST00000415997.1:54 uc061zht.1:54 ENST00000491395.5:68 uc061zhu.1:68 | ||
|chr=chr21 | |chr=chr21 | ||
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|distance_to_tss=89299 | |distance_to_tss=89299 | ||
|end=26051096 | |end=26051096 | ||
|end_of_center_position=26051091 | |||
|entrez_id=351 | |entrez_id=351 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
|gene_alias=AAA | |gene_alias=AAA | ||
|gene_description=amyloid beta precursor protein | |gene_description=amyloid beta precursor protein | ||
|gene_name=APP | |gene_name=APP | ||
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|species=human | |species=human | ||
|start=26051085 | |start=26051085 | ||
|start_of_center_position=26051090 | |||
|strand=- | |strand=- | ||
|transcript_name=BC018937 | |transcript_name=BC018937 | ||
Revision as of 15:28, 12 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 89299 |
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| Nearest PromoterID: | NM_001136016 |
| Entrez ID: | 351 |
| Nearest Unigene: | Hs.434980 |
| Nearest Refseq: | NM_000484 |
| Nearest Ensembl: | ENSG00000142192 |
| Gene Name: | APP |
| Gene Alias: | AAA |
| Gene Description: | amyloid beta precursor protein |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |