TSS: Hg 228577.1: Difference between revisions

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(Created page with "{{TSSDetail |all_trans=ENST00000614967.4:0 NR_111920:0 NM_001025161:0 uc062euw.1:0 ENST00000358097.8:1 ENST00000610593.4:1 ENST00000435688.1:1 uc062euv.1:1 uc062euy.1:1 uc062e...")
 
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|distance_to_tss=2
|distance_to_tss=2
|end=42144554
|end=42144554
|end_of_center_position=42144552
|entrez_id=101929829
|entrez_id=101929829
|gc_percent=0.616915
|gc_percent=0.616915
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|species=human
|species=human
|start=42144549
|start=42144549
|start_of_center_position=42144551
|strand=-
|strand=-
|tata_box="-33(CCCTTTATAAGG,+,0.00),-33(CCCTTTATAAGG,-,0.00),-31(CTTTATAAGGGA,+,0.00)"
|tata_box="-33(CCCTTTATAAGG,+,0.00),-33(CCCTTTATAAGG,-,0.00),-31(CTTTATAAGGGA,+,0.00)"

Revision as of 22:09, 12 May 2019

Basic information about the TSS


TSS ID:hg_228577.1
Species:human
Chr:chr22
Start:42144549
End:42144554
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation


Transcript_name:ENST00000614967.4 NR_111920 NM_001025161 uc062euw.1
Distance:0
GeneID:1564 1565
HGNC/MGI_ID:HGNC:2624 HGNC:2625
UniProt_ID:A0A087WXN8 Q5Y7H2
Gene_name:cytochrome P450 family 2 subfamily D member 6; cytochrome P450 family 2 subfamily D member 7 (gene/pseudogene)
Gene_symbol:CYP2D6 CYP2D7
Gene_synonyms:CPD6 CYP2D P450-DB1 P450C2D
Gene_source:HGNC:2624 HGNC:2625



TATA-Box annotation


Distance to TSS:2
Nearest PromoterID:NR_111920
Entrez ID:101929829
Nearest Unigene:Hs.648256
Nearest Refseq:NR_111920
Nearest Ensembl:
Gene Name:cytochrome P450 family 2 subfamily D member 6; cytochrome P450 family 2 subfamily D member 7 (gene/pseudogene)
Gene Alias:-
Gene Description:cytochrome P450 family 2 subfamily D member 6 pseudogene
Gene Type:pseudo
CpG%:0.025
GC%:0.616915
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-33(CCCTTTATAAGG,+,0.00),-33(CCCTTTATAAGG,-,0.00),-31(CTTTATAAGGGA,+,0.00)"



TSS expression

Expression data not found.