TSS: Hg 121987.1: Difference between revisions

Revision as of 22:26, 12 May 2019

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 16)

Gene and protein annotation

Transcript_name:	ENST00000236826.7 ENST00000531168.1 ENST00000532799.1 NM_001304442 NM_001304441 NM_002424 uc001phe.2 uc058gwb.1 uc058gwc.1 AK292659 AK303388 AK303511 AK313374
Distance:	0
GeneID:	4317
HGNC/MGI_ID:	HGNC:7175
UniProt_ID:	A8K9E4 B4E0I2 B4E0T0 E9PIY7 E9PJB3 P22894

TATA-Box annotation

Distance to TSS:	0
Nearest PromoterID:	NM_001304442
Entrez ID:	4317
Nearest Unigene:	Hs.161839
Nearest Refseq:	NM_002424
Nearest Ensembl:	ENSG00000118113
Gene Name:	matrix metallopeptidase 8
Gene Alias:	CLG1
Gene Description:	matrix metallopeptidase 8
Gene Type:	protein-coding
CpG%:	0.01
GC%:	0.467662
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):	"-33(GGCTTTAAAGAG,-,0.00)"

TSS expression

Expression data not found.

@@ Line 9: / Line 9: @@
 |distance_to_tss=0
 |end=102724957
+|end_of_center_position=102724954
 |entrez_id=4317
 |gc_percent=0.467662
-|gene_alias=CLG1|HNC|MMP-8|PMNL-CL
+|gene_alias=CLG1
 |gene_description=matrix metallopeptidase 8
 |gene_id=4317
@@ Line 27: / Line 28: @@
 |species=human
 |start=102724950
+|start_of_center_position=102724953
 |strand=-
 |tata_box="-33(GGCTTTAAAGAG,-,0.00)"