TSS: Mm 172465.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000206356.1:55 AK145134:55 ENSMUST00000107992.1:79 NM_001008427:79 uc009gme.1:79 BC068175:79 |chr=chr7 |cpg_percent=0.03 |distance=55 |distance...") |
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{{TSSDetail | {{TSSDetail | ||
|Gm5595= | |||
|all_trans=ENSMUST00000206356.1:55 AK145134:55 ENSMUST00000107992.1:79 NM_001008427:79 uc009gme.1:79 BC068175:79 | |all_trans=ENSMUST00000206356.1:55 AK145134:55 ENSMUST00000107992.1:79 NM_001008427:79 uc009gme.1:79 BC068175:79 | ||
|chr=chr7 | |chr=chr7 | ||
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|distance_to_tss=-81 | |distance_to_tss=-81 | ||
|end=42692802 | |end=42692802 | ||
|end_of_center_position=42692800 | |||
|entrez_id=434179 | |entrez_id=434179 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
|gene_alias=EG434179 | |gene_alias=EG434179 | ||
|gene_description=zinc finger protein 975 | |gene_description=zinc finger protein 975 | ||
|gene_id=434179 | |gene_id=434179 | ||
| Line 17: | Line 19: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:3648690 | |hgnc_mgi_id=MGI:3648690 | ||
|mszf88= | |||
|nearest_ensembl=ENSMUSG00000069727 | |nearest_ensembl=ENSMUSG00000069727 | ||
|nearest_promoter_id=NM_001008427 | |nearest_promoter_id=NM_001008427 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=42692796 | |start=42692796 | ||
|start_of_center_position=42692799 | |||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000206356.1 AK145134 | |transcript_name=ENSMUST00000206356.1 AK145134 | ||
Revision as of 00:05, 13 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -81 |
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| Nearest PromoterID: | NM_001008427 |
| Entrez ID: | 434179 |
| Nearest Unigene: | Mm.284947 |
| Nearest Refseq: | NM_001008427 |
| Nearest Ensembl: | ENSMUSG00000069727 |
| Gene Name: | predicted gene 5595 |
| Gene Alias: | EG434179 |
| Gene Description: | zinc finger protein 975 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.