TSS: Mm 60329.1: Difference between revisions

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000144905.2:0 ENSMUST00000146155.7:0 ENSMUST00000107949.7:0 ENSMUST00000084937.10:0 ENSMUST00000107950.8:0 ENSMUST00000107948.7:0 uc009gox.2:0...")
 
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|distance_to_tss=65
|distance_to_tss=65
|end=44246796
|end=44246796
|end_of_center_position=44246787
|entrez_id=668661
|entrez_id=668661
|gc_percent=0.691542
|gc_percent=0.691542
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|species=mouse
|species=mouse
|start=44246777
|start=44246777
|start_of_center_position=44246786
|strand=+
|strand=+
|tata_box="-33(CGCTATAAATGG,-,0.00)"
|tata_box="-33(CGCTATAAATGG,-,0.00)"

Revision as of 00:24, 13 May 2019

Basic information about the TSS

TSS ID:mm_60329.1
Species:mouse
Chr:chr7
Start:44246777
End:44246796
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation

Transcript_name:ENSMUST00000144905.2 ENSMUST00000146155.7 ENSMUST00000107949.7 ENSMUST00000084937.10 ENSMUST00000107950.8 ENSMUST00000107948.7 uc009gox.2 AK053743 AK169836 AK049154 AK010334 AK169796 AK172418 AK162303 BC016099
Distance:0
GeneID:668661
HGNC/MGI_ID:MGI:1914226
UniProt_ID:D3Z520 Q3T9M2 Q3TE80
Gene_name:RIKEN cDNA 2410002F23 gene
Gene_symbol:2410002F23Rik
Gene_synonyms:
Gene_source:MGI:1914226



TATA-Box annotation

Distance to TSS:65
Nearest PromoterID:NM_025880
Entrez ID:668661
Nearest Unigene:Mm.274492
Nearest Refseq:NM_025880
Nearest Ensembl:ENSMUSG00000045411
Gene Name:RIKEN cDNA 2410002F23 gene
Gene Alias:-
Gene Description:RIKEN cDNA 2410002F23 gene
Gene Type:protein-coding
CpG%:0.115
GC%:0.691542
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-33(CGCTATAAATGG,-,0.00)"



TSS expression

Expression data not found.

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