TSS: Mm 66742.1: Difference between revisions

Revision as of 01:33, 13 May 2019

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 5)

Gene and protein annotation

Transcript_name:	ENSMUST00000143082.2 NM_030233 uc009gyu.2 uc009gyt.2 uc009gyv.2 AK132193 AK030833 AK019878 BC068127 AK033202 BC087944 AK134418 AK035874
Distance:	0
GeneID:	78935
HGNC/MGI_ID:	MGI:1926185
UniProt_ID:	G1UCX4 Q9D2C2 Q9D2C2-2

TATA-Box annotation

Distance to TSS:	-14
Nearest PromoterID:	NM_030233
Entrez ID:	78935
Nearest Unigene:	Mm.289866
Nearest Refseq:	NM_030233
Nearest Ensembl:	ENSMUSG00000006763
Gene Name:	serum amyloid A-like 1
Gene Alias:	5031425D22Rik
Gene Description:	serum amyloid A-like 1
Gene Type:	protein-coding
CpG%:	0.1
GC%:	0.686567
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
+|SPACIA1=
 |all_trans=ENSMUST00000143082.2:0 NM_030233:0 uc009gyu.2:0 uc009gyt.2:0 uc009gyv.2:0 AK132193:0 AK030833:0 AK019878:0 BC068127:0 AK033202:0 BC087944:0 AK134418:0 AK035874:0 BC019985:8 AB489137:11 AK188688:133
 |chr=chr7
@@ Line 6: / Line 7: @@
 |distance_to_tss=-14
 |end=46710687
+|end_of_center_position=46710665
 |entrez_id=78935
 |gc_percent=0.686567
-|gene_alias=5031425D22Rik|SPACIA1
+|gene_alias=5031425D22Rik
 |gene_description=serum amyloid A-like 1
 |gene_id=78935
@@ Line 24: / Line 26: @@
 |species=mouse
 |start=46710642
+|start_of_center_position=46710664
 |strand=-
 |transcript_name=ENSMUST00000143082.2 NM_030233 uc009gyu.2 uc009gyt.2 uc009gyv.2 AK132193 AK030833 AK019878 BC068127 AK033202 BC087944 AK134418 AK035874