TSS: Hg 124359.1: Difference between revisions

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(Created page with "{{TSSDetail |all_trans=ENST00000540583.5:0 ENST00000534843.1:0 ENST00000326765.10:0 NM_001130415:0 uc058lja.1:0 uc058ljb.1:0 uc001rau.5:0 AK127712:0 BC042478:0 AM393383:64 ENS...")
 
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|distance_to_tss=-1
|distance_to_tss=-1
|end=12725937
|end=12725937
|end_of_center_position=12725917
|entrez_id=81575
|entrez_id=81575
|gc_percent=0.626866
|gc_percent=0.626866
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|species=human
|species=human
|start=12725895
|start=12725895
|start_of_center_position=12725916
|strand=+
|strand=+
|transcript_name=ENST00000540583.5 ENST00000534843.1 ENST00000326765.10 NM_001130415 uc058lja.1 uc058ljb.1 uc001rau.5 AK127712 BC042478
|transcript_name=ENST00000540583.5 ENST00000534843.1 ENST00000326765.10 NM_001130415 uc058lja.1 uc058ljb.1 uc001rau.5 AK127712 BC042478

Revision as of 04:24, 13 May 2019

Basic information about the TSS


TSS ID:hg_124359.1
Species:human
Chr:chr12
Start:12725895
End:12725937
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation


Transcript_name:ENST00000540583.5 ENST00000534843.1 ENST00000326765.10 NM_001130415 uc058lja.1 uc058ljb.1 uc001rau.5 AK127712 BC042478
Distance:0
GeneID:51202 81575
HGNC/MGI_ID:HGNC:18682 HGNC:25268
UniProt_ID:F5GX34 Q96LR9
Gene_name:DEAD-box helicase 47; apolipoprotein L domain containing 1
Gene_symbol:APOLD1 DDX47
Gene_synonyms:DKFZP434F0318 DKFZp564O176 FLJ25138 FLJ30012 HQ0256 RRP3
Gene_source:HGNC:18682 HGNC:25268



TATA-Box annotation


Distance to TSS:-1
Nearest PromoterID:NM_001130415
Entrez ID:81575
Nearest Unigene:Hs.23388
Nearest Refseq:NM_030817
Nearest Ensembl:ENSG00000178878
Gene Name:DEAD-box helicase 47; apolipoprotein L domain containing 1
Gene Alias:VERGE
Gene Description:apolipoprotein L domain containing 1
Gene Type:protein-coding
CpG%:0.095
GC%:0.626866
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.