TSS: Hg 43829.1: Difference between revisions

Revision as of 07:08, 13 May 2019

Basic information about the TSS

TSS ID:	hg_43829.1
Species:	human
Chr:	chr3

Start:	113019643
End:	113019686
Strand:	-

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 16)

Gene and protein annotation

Transcript_name:	ENST00000472637.5 ENST00000469809.5 ENST00000472705.5 ENST00000469169.5 ENST00000489848.5 ENST00000462295.5 ENST00000461381.5 ENST00000496206.5 ENST00000494575.5 ENST00000470663.1 ENST00000496340.1 uc062mlo.1 uc062mlq.1 uc062mls.1 uc062mlt.1 uc062mlv.1 uc062mlw.1 uc062mlx.1 uc062mmb.1 uc062mmf.1 uc062mmh.1 uc062mmi.1 AL117573 BC056663 BC067743 AK301161 AK024325 AK304022 AK295165 AK304083 AK295954 AK300811 EU832050 EU831596 KJ898562 EU831956 EU831683 AK293218 CU688320
Distance:	0
GeneID:	25871
HGNC/MGI_ID:	HGNC:24496
UniProt_ID:	B4DDJ6 B4DHL5 B4DJ73 B4DUV5 B4DVN9 B4E1X5 B4E228 E9PFF8 F2Z3E4 F8WBQ8 F8WC60 F8WDL7

Gene_name:	chromosome 3 open reading frame 17
Gene_symbol:	C3orf17
Gene_synonyms:	DKFZP434F2021 NET17
Gene_source:	HGNC:24496

TATA-Box annotation

Distance to TSS:	43
Nearest PromoterID:	NM_015412
Entrez ID:	25871
Nearest Unigene:	Hs.591288
Nearest Refseq:	NM_015412
Nearest Ensembl:	ENSG00000163608
Gene Name:	chromosome 3 open reading frame 17
Gene Alias:	C3orf17
Gene Description:	nucleolus and neural progenitor protein
Gene Type:	protein-coding
CpG%:	0.11
GC%:	0.711443
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
+|NET17=
 |all_trans=ENST00000472637.5:0 ENST00000469809.5:0 ENST00000472705.5:0 ENST00000469169.5:0 ENST00000489848.5:0 ENST00000462295.5:0 ENST00000461381.5:0 ENST00000496206.5:0 ENST00000494575.5:0 ENST00000470663.1:0 ENST00000496340.1:0 uc062mlo.1:0 uc062mlq.1:0 uc062mls.1:0 uc062mlt.1:0 uc062mlv.1:0 uc062mlw.1:0 uc062mlx.1:0 uc062mmb.1:0 uc062mmf.1:0 uc062mmh.1:0 uc062mmi.1:0 AL117573:0 BC056663:0 BC067743:0 AK301161:0 AK024325:0 AK304022:0 AK295165:0 AK304083:0 AK295954:0 AK300811:0 EU832050:0 EU831596:0 KJ898562:0 EU831956:0 EU831683:0 AK293218:0 CU688320:0 ENST00000486271.5:-20 uc062mlp.1:-20 BC014673:-20 NM_015412:-22 NR_027796:-22 NR_027794:-22 ENST00000491121.1:-35 uc062mme.1:-35 ENST00000494891.5:41 uc062mmg.1:41 ENST00000383675.6:-47 NM_001319109:-47 NM_001319110:-47 NM_001319111:-47 NM_001319112:-47 NM_001319114:-47 NM_001319115:-47 NR_134969:-47 uc003dzu.4:-47 CR749341:-47 ENST00000460410.5:-146 uc062mmc.1:-146 ENST00000314400.9:-153 uc003dzr.4:-153 ENST00000494164.5:-165 uc062mmd.1:-165 ENST00000473284.5:-175 uc062mlu.1:-175 ENST00000472166.1:484 uc062mmj.1:484
 |chr=chr3
@@ Line 6: / Line 7: @@
 |distance_to_tss=43
 |end=113019686
+|end_of_center_position=113019665
 |entrez_id=25871
 |gc_percent=0.711443
-|gene_alias=C3orf17|NET17
+|gene_alias=C3orf17
 |gene_description=nucleolus and neural progenitor protein
 |gene_id=25871
@@ Line 24: / Line 26: @@
 |species=human
 |start=113019643
+|start_of_center_position=113019664
 |strand=-
 |transcript_name=ENST00000472637.5 ENST00000469809.5 ENST00000472705.5 ENST00000469169.5 ENST00000489848.5 ENST00000462295.5 ENST00000461381.5 ENST00000496206.5 ENST00000494575.5 ENST00000470663.1 ENST00000496340.1 uc062mlo.1 uc062mlq.1 uc062mls.1 uc062mlt.1 uc062mlv.1 uc062mlw.1 uc062mlx.1 uc062mmb.1 uc062mmf.1 uc062mmh.1 uc062mmi.1 AL117573 BC056663 BC067743 AK301161 AK024325 AK304022 AK295165 AK304083 AK295954 AK300811 EU832050 EU831596 KJ898562 EU831956 EU831683 AK293218 CU688320