TSS: Hg 43830.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000470663.1:7 uc062mmh.1:7 ENST00000486271.5:-12 uc062mlp.1:-12 BC014673:-12 NM_015412:-14 NR_027796:-14 NR_027794:-14 ENST00000461381.5:17 ENST00...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|NET17= | |||
|all_trans=ENST00000470663.1:7 uc062mmh.1:7 ENST00000486271.5:-12 uc062mlp.1:-12 BC014673:-12 NM_015412:-14 NR_027796:-14 NR_027794:-14 ENST00000461381.5:17 ENST00000494575.5:17 ENST00000496340.1:17 uc062mlx.1:17 uc062mmf.1:17 uc062mmi.1:17 AK293218:17 ENST00000489848.5:18 uc062mlv.1:18 AK295954:18 BC067743:20 ENST00000462295.5:22 uc062mlw.1:22 AK024325:22 AK304083:22 AK300811:22 ENST00000472705.5:24 ENST00000469169.5:24 uc062mls.1:24 uc062mlt.1:24 AK304022:24 AK295165:24 ENST00000491121.1:-27 uc062mme.1:-27 ENST00000469809.5:30 uc062mlq.1:30 ENST00000472637.5:34 uc062mlo.1:34 BC056663:34 AL117573:38 ENST00000383675.6:-39 NM_001319109:-39 NM_001319110:-39 NM_001319111:-39 NM_001319112:-39 NM_001319114:-39 NM_001319115:-39 NR_134969:-39 uc003dzu.4:-39 CR749341:-39 KJ898562:39 CU688320:39 EU832050:40 EU831596:40 EU831956:40 EU831683:40 AK301161:41 ENST00000496206.5:44 uc062mmb.1:44 ENST00000494891.5:85 uc062mmg.1:85 ENST00000460410.5:-138 uc062mmc.1:-138 ENST00000314400.9:-145 uc003dzr.4:-145 ENST00000494164.5:-157 uc062mmd.1:-157 ENST00000473284.5:-167 uc062mlu.1:-167 | |all_trans=ENST00000470663.1:7 uc062mmh.1:7 ENST00000486271.5:-12 uc062mlp.1:-12 BC014673:-12 NM_015412:-14 NR_027796:-14 NR_027794:-14 ENST00000461381.5:17 ENST00000494575.5:17 ENST00000496340.1:17 uc062mlx.1:17 uc062mmf.1:17 uc062mmi.1:17 AK293218:17 ENST00000489848.5:18 uc062mlv.1:18 AK295954:18 BC067743:20 ENST00000462295.5:22 uc062mlw.1:22 AK024325:22 AK304083:22 AK300811:22 ENST00000472705.5:24 ENST00000469169.5:24 uc062mls.1:24 uc062mlt.1:24 AK304022:24 AK295165:24 ENST00000491121.1:-27 uc062mme.1:-27 ENST00000469809.5:30 uc062mlq.1:30 ENST00000472637.5:34 uc062mlo.1:34 BC056663:34 AL117573:38 ENST00000383675.6:-39 NM_001319109:-39 NM_001319110:-39 NM_001319111:-39 NM_001319112:-39 NM_001319114:-39 NM_001319115:-39 NR_134969:-39 uc003dzu.4:-39 CR749341:-39 KJ898562:39 CU688320:39 EU832050:40 EU831596:40 EU831956:40 EU831683:40 AK301161:41 ENST00000496206.5:44 uc062mmb.1:44 ENST00000494891.5:85 uc062mmg.1:85 ENST00000460410.5:-138 uc062mmc.1:-138 ENST00000314400.9:-145 uc003dzr.4:-145 ENST00000494164.5:-157 uc062mmd.1:-157 ENST00000473284.5:-167 uc062mlu.1:-167 | ||
|chr=chr3 | |chr=chr3 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=17 | |distance_to_tss=17 | ||
|end=113019694 | |end=113019694 | ||
|end_of_center_position=113019691 | |||
|entrez_id=25871 | |entrez_id=25871 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
|gene_alias=C3orf17 | |gene_alias=C3orf17 | ||
|gene_description=nucleolus and neural progenitor protein | |gene_description=nucleolus and neural progenitor protein | ||
|gene_id=25871 | |gene_id=25871 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=113019687 | |start=113019687 | ||
|start_of_center_position=113019690 | |||
|strand=- | |strand=- | ||
|transcript_name=ENST00000470663.1 uc062mmh.1 | |transcript_name=ENST00000470663.1 uc062mmh.1 | ||
Revision as of 07:08, 13 May 2019
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 17 |
|---|---|
| Nearest PromoterID: | NM_015412 |
| Entrez ID: | 25871 |
| Nearest Unigene: | Hs.591288 |
| Nearest Refseq: | NM_015412 |
| Nearest Ensembl: | ENSG00000163608 |
| Gene Name: | chromosome 3 open reading frame 17 |
| Gene Alias: | C3orf17 |
| Gene Description: | nucleolus and neural progenitor protein |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.