TSS: Hg 43832.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|NET17= | |||
|all_trans=ENST00000491121.1:0 uc062mme.1:0 ENST00000383675.6:-10 NM_001319109:-10 NM_001319110:-10 NM_001319111:-10 NM_001319112:-10 NM_001319114:-10 NM_001319115:-10 NR_134969:-10 uc003dzu.4:-10 CR749341:-10 NM_015412:11 NR_027796:11 NR_027794:11 ENST00000486271.5:13 uc062mlp.1:13 BC014673:13 ENST00000470663.1:38 uc062mmh.1:38 ENST00000461381.5:48 ENST00000494575.5:48 ENST00000496340.1:48 uc062mlx.1:48 uc062mmf.1:48 uc062mmi.1:48 AK293218:48 ENST00000489848.5:49 uc062mlv.1:49 AK295954:49 BC067743:51 ENST00000462295.5:53 uc062mlw.1:53 AK024325:53 AK304083:53 AK300811:53 ENST00000472705.5:55 ENST00000469169.5:55 uc062mls.1:55 uc062mlt.1:55 AK304022:55 AK295165:55 ENST00000469809.5:61 uc062mlq.1:61 ENST00000472637.5:65 uc062mlo.1:65 BC056663:65 AL117573:69 KJ898562:70 CU688320:70 EU832050:71 EU831596:71 EU831956:71 EU831683:71 AK301161:72 ENST00000496206.5:75 uc062mmb.1:75 ENST00000460410.5:-109 uc062mmc.1:-109 ENST00000314400.9:-116 ENST00000494891.5:116 uc003dzr.4:-116 uc062mmg.1:116 ENST00000494164.5:-128 uc062mmd.1:-128 ENST00000473284.5:-138 uc062mlu.1:-138 | |all_trans=ENST00000491121.1:0 uc062mme.1:0 ENST00000383675.6:-10 NM_001319109:-10 NM_001319110:-10 NM_001319111:-10 NM_001319112:-10 NM_001319114:-10 NM_001319115:-10 NR_134969:-10 uc003dzu.4:-10 CR749341:-10 NM_015412:11 NR_027796:11 NR_027794:11 ENST00000486271.5:13 uc062mlp.1:13 BC014673:13 ENST00000470663.1:38 uc062mmh.1:38 ENST00000461381.5:48 ENST00000494575.5:48 ENST00000496340.1:48 uc062mlx.1:48 uc062mmf.1:48 uc062mmi.1:48 AK293218:48 ENST00000489848.5:49 uc062mlv.1:49 AK295954:49 BC067743:51 ENST00000462295.5:53 uc062mlw.1:53 AK024325:53 AK304083:53 AK300811:53 ENST00000472705.5:55 ENST00000469169.5:55 uc062mls.1:55 uc062mlt.1:55 AK304022:55 AK295165:55 ENST00000469809.5:61 uc062mlq.1:61 ENST00000472637.5:65 uc062mlo.1:65 BC056663:65 AL117573:69 KJ898562:70 CU688320:70 EU832050:71 EU831596:71 EU831956:71 EU831683:71 AK301161:72 ENST00000496206.5:75 uc062mmb.1:75 ENST00000460410.5:-109 uc062mmc.1:-109 ENST00000314400.9:-116 ENST00000494891.5:116 uc003dzr.4:-116 uc062mmg.1:116 ENST00000494164.5:-128 uc062mmd.1:-128 ENST00000473284.5:-138 uc062mlu.1:-138 | ||
|chr=chr3 | |chr=chr3 | ||
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|distance_to_tss=12 | |distance_to_tss=12 | ||
|end=113019723 | |end=113019723 | ||
|end_of_center_position=113019721 | |||
|entrez_id=25871 | |entrez_id=25871 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
|gene_alias=C3orf17 | |gene_alias=C3orf17 | ||
|gene_description=nucleolus and neural progenitor protein | |gene_description=nucleolus and neural progenitor protein | ||
|gene_id=25871 | |gene_id=25871 | ||
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|species=human | |species=human | ||
|start=113019718 | |start=113019718 | ||
|start_of_center_position=113019720 | |||
|strand=- | |strand=- | ||
|transcript_name=ENST00000491121.1 uc062mme.1 | |transcript_name=ENST00000491121.1 uc062mme.1 | ||
Revision as of 07:08, 13 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 12 |
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| Nearest PromoterID: | NR_134969 |
| Entrez ID: | 25871 |
| Nearest Unigene: | Hs.591288 |
| Nearest Refseq: | NM_015412 |
| Nearest Ensembl: | ENSG00000163608 |
| Gene Name: | chromosome 3 open reading frame 17 |
| Gene Alias: | C3orf17 |
| Gene Description: | nucleolus and neural progenitor protein |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.