TSS: Hg 126751.1: Difference between revisions

Revision as of 10:43, 13 May 2019

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 16)

Gene and protein annotation

TATA-Box annotation

Distance to TSS:	228
Nearest PromoterID:	NM_022456
Entrez ID:	117177
Nearest Unigene:	Hs.258209
Nearest Refseq:	NM_022456
Nearest Ensembl:	ENSG00000127328
Gene Name:	RAB3IP
Gene Alias:	RABIN3
Gene Description:	RAB3A interacting protein
Gene Type:	protein-coding
CpG%:	0.155
GC%:	0.766169
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetail
+|RABIN8=
 |all_trans=BC002556:-6 BC059358:-9 BC014553:-33 ENST00000378815.10:-47 ENST00000483530.6:-47 ENST00000417413.7:-47 uc058qut.1:-47 uc058quu.1:-47 uc001svn.5:-47 AK225441:-47 AJ312896:-47 AJ312898:-47 AJ312900:-47 AK026201:-47 AK314547:-58 ENST00000549760.1:190 uc058quv.1:190 NR_103519:-223 NM_175624:-223 NM_022456:-223 ENST00000247833.11:-228 uc001svm.5:-228 ENST00000550536.5:471 NR_103520:471 NM_175625:471 NM_175623:471 uc001svp.4:471 ENST00000378809.8:481 ENST00000362025.9:481 uc058quw.1:481 uc001svq.5:481 ENST00000552199.5:489 uc058qux.1:489 AJ312897:489 AJ312899:489 AJ312901:489
 |chr=chr12
@@ Line 6: / Line 7: @@
 |distance_to_tss=228
 |end=69738919
+|end_of_center_position=69738914
 |entrez_id=117177
 |gc_percent=0.766169
-|gene_alias=RABIN3|RABIN8
+|gene_alias=RABIN3
 |gene_description=RAB3A interacting protein
 |gene_name=RAB3IP
@@ Line 19: / Line 21: @@
 |species=human
 |start=69738908
+|start_of_center_position=69738913
 |strand=+
 |transcript_name=BC002556