TSS: Hg 40699.1: Difference between revisions

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(Created page with "{{TSSDetail |all_trans=ENST00000457233.5:0 ENST00000452844.5:0 ENST00000429897.5:0 ENST00000453324.5:0 uc062rrw.1:0 uc062rrx.1:0 uc062rry.1:0 uc062rrz.1:0 BC062438:0 AK057553:...")
 
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{{TSSDetail
{{TSSDetail
|SDHALP2=
|all_trans=ENST00000457233.5:0 ENST00000452844.5:0 ENST00000429897.5:0 ENST00000453324.5:0 uc062rrw.1:0 uc062rrx.1:0 uc062rry.1:0 uc062rrz.1:0 BC062438:0 AK057553:0 BC073879:0 ENST00000445430.5:1 uc062rsa.1:1 BC064564:1 BC053551:-11 ENST00000425425.1:17 uc062rsb.1:17 AK074764:17 ENST00000455183.1:20 NR_003265:-20
|all_trans=ENST00000457233.5:0 ENST00000452844.5:0 ENST00000429897.5:0 ENST00000453324.5:0 uc062rrw.1:0 uc062rrx.1:0 uc062rry.1:0 uc062rrz.1:0 BC062438:0 AK057553:0 BC073879:0 ENST00000445430.5:1 uc062rsa.1:1 BC064564:1 BC053551:-11 ENST00000425425.1:17 uc062rsb.1:17 AK074764:17 ENST00000455183.1:20 NR_003265:-20
|chr=chr3
|chr=chr3
Line 6: Line 7:
|distance_to_tss=28
|distance_to_tss=28
|end=195658076
|end=195658076
|end_of_center_position=195658068
|entrez_id=727956
|entrez_id=727956
|gc_percent=0.756219
|gc_percent=0.756219
|gene_alias=SDHAL2|SDHALP2
|gene_alias=SDHAL2
|gene_description=succinate dehydrogenase complex flavoprotein subunit A pseudogene 2
|gene_description=succinate dehydrogenase complex flavoprotein subunit A pseudogene 2
|gene_id=727956
|gene_id=727956
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|species=human
|species=human
|start=195658058
|start=195658058
|start_of_center_position=195658067
|strand=+
|strand=+
|transcript_name=ENST00000457233.5 ENST00000452844.5 ENST00000429897.5 ENST00000453324.5 uc062rrw.1 uc062rrx.1 uc062rry.1 uc062rrz.1 BC062438 AK057553 BC073879
|transcript_name=ENST00000457233.5 ENST00000452844.5 ENST00000429897.5 ENST00000453324.5 uc062rrw.1 uc062rrx.1 uc062rry.1 uc062rrz.1 BC062438 AK057553 BC073879

Revision as of 13:54, 13 May 2019

Basic information about the TSS

TSS ID:hg_40699.1
Species:human
Chr:chr3
Start:195658058
End:195658076
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:ENST00000457233.5 ENST00000452844.5 ENST00000429897.5 ENST00000453324.5 uc062rrw.1 uc062rrx.1 uc062rry.1 uc062rrz.1 BC062438 AK057553 BC073879
Distance:0
GeneID:727956
HGNC/MGI_ID:HGNC:27408 HGNC:48729
UniProt_ID:
Gene_name:long intergenic non-protein coding RNA 969; succinate dehydrogenase complex flavoprotein subunit A pseudogene 2
Gene_symbol:LINC00969 SDHAP2
Gene_synonyms:
Gene_source:HGNC:27408 HGNC:48729



TATA-Box annotation

Distance to TSS:28
Nearest PromoterID:NR_003265
Entrez ID:727956
Nearest Unigene:Hs.596261
Nearest Refseq:NR_003265
Nearest Ensembl:ENSG00000242086
Gene Name:long intergenic non-protein coding RNA 969; succinate dehydrogenase complex flavoprotein subunit A pseudogene 2
Gene Alias:SDHAL2
Gene Description:succinate dehydrogenase complex flavoprotein subunit A pseudogene 2
Gene Type:pseudo
CpG%:0.145
GC%:0.756219
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.

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