TSS: Mm 129043.1: Difference between revisions

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000187250.1:-58 AK152247:-58 AK153212:-58 ENSMUST00000190944.1:215 |chr=chr15 |cpg_percent=0.005 |distance=-58 |distance_to_tss=-20207 |end=751...")
 
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{{TSSDetail
{{TSSDetail
|Gr1=
|Ly-6G=
|all_trans=ENSMUST00000187250.1:-58 AK152247:-58 AK153212:-58 ENSMUST00000190944.1:215
|all_trans=ENSMUST00000187250.1:-58 AK152247:-58 AK153212:-58 ENSMUST00000190944.1:215
|chr=chr15
|chr=chr15
Line 6: Line 8:
|distance_to_tss=-20207
|distance_to_tss=-20207
|end=75135070
|end=75135070
|end_of_center_position=75135055
|entrez_id=546644
|entrez_id=546644
|gc_percent=0.522388
|gc_percent=0.522388
|gene_alias=Gr-1|Gr1|Ly-6G
|gene_alias=Gr-1
|gene_description="lymphocyte antigen 6 complex, locus G"
|gene_description="lymphocyte antigen 6 complex, locus G"
|gene_id=546643
|gene_id=546643
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|species=mouse
|species=mouse
|start=75135038
|start=75135038
|start_of_center_position=75135054
|strand=-
|strand=-
|transcript_name=ENSMUST00000187250.1 AK152247 AK153212
|transcript_name=ENSMUST00000187250.1 AK152247 AK153212

Revision as of 16:39, 13 May 2019

Basic information about the TSS


TSS ID:mm_129043.1
Species:mouse
Chr:chr15
Start:75135038
End:75135070
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation


Transcript_name:ENSMUST00000187250.1 AK152247 AK153212
Distance:-58
GeneID:546643
HGNC/MGI_ID:MGI:3612406
UniProt_ID:Q3U8E9
Gene_name:RIKEN cDNA I830127L07 gene
Gene_symbol:I830127L07Rik
Gene_synonyms:
Gene_source:MGI:3612406



TATA-Box annotation


Distance to TSS:-20207
Nearest PromoterID:NM_001310438
Entrez ID:546644
Nearest Unigene:
Nearest Refseq:NM_008531
Nearest Ensembl:ENSMUSG00000022582
Gene Name:RIKEN cDNA I830127L07 gene
Gene Alias:Gr-1
Gene Description:"lymphocyte antigen 6 complex, locus G"
Gene Type:protein-coding
CpG%:0.005
GC%:0.522388
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.