TSS: Hg 134644.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AL832478:0 BC040165:7 ENST00000380482.8:-73 uc001uth.5:-73 AK055635:-73 NM_032849:-89 BC101624:153 BC101626:153 CU691826:229 ENST00000428944.1:422 uc058...") |
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{{TSSDetail | {{TSSDetail | ||
|C13orf33= | |||
|MEDA-4= | |||
|MEDA4= | |||
|all_trans=AL832478:0 BC040165:7 ENST00000380482.8:-73 uc001uth.5:-73 AK055635:-73 NM_032849:-89 BC101624:153 BC101626:153 CU691826:229 ENST00000428944.1:422 uc058wek.1:422 | |all_trans=AL832478:0 BC040165:7 ENST00000380482.8:-73 uc001uth.5:-73 AK055635:-73 NM_032849:-89 BC101624:153 BC101626:153 CU691826:229 ENST00000428944.1:422 uc058wek.1:422 | ||
|chr=chr13 | |chr=chr13 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=99 | |distance_to_tss=99 | ||
|end=30906284 | |end=30906284 | ||
|end_of_center_position=30906274 | |||
|entrez_id=84935 | |entrez_id=84935 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
|gene_alias=AWMS3 | |gene_alias=AWMS3 | ||
|gene_description=mesenteric estrogen dependent adipogenesis | |gene_description=mesenteric estrogen dependent adipogenesis | ||
|gene_name=MEDAG | |gene_name=MEDAG | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hAWMS3= | |||
|nearest_ensembl=ENSG00000102802 | |nearest_ensembl=ENSG00000102802 | ||
|nearest_promoter_id=NM_032849 | |nearest_promoter_id=NM_032849 | ||
| Line 19: | Line 24: | ||
|species=human | |species=human | ||
|start=30906263 | |start=30906263 | ||
|start_of_center_position=30906273 | |||
|strand=+ | |strand=+ | ||
|tata_box="-35(GCGGATAAAAGG,-,0.00)" | |tata_box="-35(GCGGATAAAAGG,-,0.00)" | ||
Revision as of 17:21, 13 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 99 |
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| Nearest PromoterID: | NM_032849 |
| Entrez ID: | 84935 |
| Nearest Unigene: | Hs.147880 |
| Nearest Refseq: | NM_032849 |
| Nearest Ensembl: | ENSG00000102802 |
| Gene Name: | MEDAG |
| Gene Alias: | AWMS3 |
| Gene Description: | mesenteric estrogen dependent adipogenesis |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(GCGGATAAAAGG,-,0.00)" |