TSS: Mm 77541.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr8 |cpg_percent=0.085 |distance= |distance_to_tss=-80 |end=123102280 |entrez_id=270106 |gc_percent=0.547264 |gene_alias=A52|L13 |gene_description=ribosomal...") |
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{{TSSDetail | {{TSSDetail | ||
|L13= | |||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
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|distance_to_tss=-80 | |distance_to_tss=-80 | ||
|end=123102280 | |end=123102280 | ||
|end_of_center_position=123102271 | |||
|entrez_id=270106 | |entrez_id=270106 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
|gene_alias=A52 | |gene_alias=A52 | ||
|gene_description=ribosomal protein L13 | |gene_description=ribosomal protein L13 | ||
|gene_name=Rpl13 | |gene_name=Rpl13 | ||
| Line 18: | Line 20: | ||
|species=mouse | |species=mouse | ||
|start=123102260 | |start=123102260 | ||
|start_of_center_position=123102270 | |||
|strand=- | |strand=- | ||
|tata_box="-28(GCCTTTCTAGCC,+,0.00)" | |tata_box="-28(GCCTTTCTAGCC,+,0.00)" | ||
Revision as of 19:53, 13 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -80 |
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| Nearest PromoterID: | NM_016738 |
| Entrez ID: | 270106 |
| Nearest Unigene: | Mm.319719 |
| Nearest Refseq: | NM_016738 |
| Nearest Ensembl: | ENSMUSG00000000740 |
| Gene Name: | Rpl13 |
| Gene Alias: | A52 |
| Gene Description: | ribosomal protein L13 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-28(GCCTTTCTAGCC,+,0.00)" |