TSS: Mm 77582.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000181805.1:-68 uc009nwn.1:-68 AK076318:-68 |chr=chr8 |cpg_percent=0.02 |distance=-68 |distance_to_tss=20191 |end=123754160 |entrez_id=234863 |...") |
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|distance_to_tss=20191 | |distance_to_tss=20191 | ||
|end=123754160 | |end=123754160 | ||
|end_of_center_position=123754150 | |||
|entrez_id=234863 | |entrez_id=234863 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
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|species=mouse | |species=mouse | ||
|start=123754138 | |start=123754138 | ||
|start_of_center_position=123754149 | |||
|strand=- | |strand=- | ||
|tata_box="-28(GCCTTTTAAAGG,-,0.00),-27(CCTTTTAAAGGC,+,0.00),-26(CTTTTAAAGGCG,+,0.00)" | |tata_box="-28(GCCTTTTAAAGG,-,0.00),-27(CCTTTTAAAGGC,+,0.00),-26(CTTTTAAAGGCG,+,0.00)" | ||
Revision as of 20:02, 13 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 20191 |
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| Nearest PromoterID: | NR_040702 |
| Entrez ID: | 234863 |
| Nearest Unigene: | Mm.246601 |
| Nearest Refseq: | NR_040702 |
| Nearest Ensembl: | ENSMUSG00000110599 |
| Gene Name: | RIKEN cDNA 4732419C18 gene |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA 6030466F02 gene |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-28(GCCTTTTAAAGG,-,0.00),-27(CCTTTTAAAGGC,+,0.00),-26(CTTTTAAAGGCG,+,0.00)" |
TSS expression
Expression data not found.