TSS: Mm 77879.1: Difference between revisions

Revision as of 20:47, 13 May 2019

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 5)

Gene and protein annotation

Gene_name:	matrix metallopeptidase 13
Gene_symbol:	Mmp13
Gene_synonyms:	Clg Collagenase-3 MMP-13 Mmp1 collagenase-1 interstitial_collagenase
Gene_source:	MGI:1340026

TATA-Box annotation

Distance to TSS:	15
Nearest PromoterID:	NM_008607
Entrez ID:	17386
Nearest Unigene:	Mm.5022
Nearest Refseq:	NM_008607
Nearest Ensembl:	ENSMUSG00000050578
Gene Name:	matrix metallopeptidase 13
Gene Alias:	Clg
Gene Description:	matrix metallopeptidase 13
Gene Type:	protein-coding
CpG%:	0.005
GC%:	0.512438
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
+|MMP-13=
+|Mmp1=
 |all_trans=AK150728:0 AK151626:0 AK152916:0 AK155188:0 AK153458:0 AK152507:0 AK159921:0 AK160819:0 ENSMUST00000015394.8:-7 NM_008607:-7 uc009ocg.2:-7 BC125320:-7 BC125322:-7 X66473:8
 |chr=chr9
@@ Line 6: / Line 8: @@
 |distance_to_tss=15
 |end=7272537
+|end_of_center_position=7272529
 |entrez_id=17386
 |gc_percent=0.512438
-|gene_alias=Clg|MMP-13|Mmp1
+|gene_alias=Clg
 |gene_description=matrix metallopeptidase 13
 |gene_id=17386
@@ Line 24: / Line 27: @@
 |species=mouse
 |start=7272520
+|start_of_center_position=7272528
 |strand=+
 |transcript_name=AK150728 AK151626 AK152916 AK155188 AK153458 AK152507 AK159921 AK160819