TSS: Mm 77977.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr9 |cpg_percent=0.01 |distance= |distance_to_tss=2442 |end=7870735 |entrez_id=11796 |gc_percent=0.507463 |gene_alias=AW107670|Api1|Api2|Birc2|C-IAP2|HIAP2|I...") |
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{{TSSDetail | {{TSSDetail | ||
|Api1= | |||
|Api2= | |||
|Birc2= | |||
|C-IAP2= | |||
|HIAP2= | |||
|IAP1= | |||
|IAP2= | |||
|MIAP1= | |||
|MIAP2= | |||
|MIHB= | |||
|MIHC= | |||
|RNF49= | |||
|cIAP-1= | |||
|cIAP-2= | |||
|cIAP1= | |||
|cIAP2= | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 5: | Line 21: | ||
|distance_to_tss=2442 | |distance_to_tss=2442 | ||
|end=7870735 | |end=7870735 | ||
|end_of_center_position=7870729 | |||
|entrez_id=11796 | |entrez_id=11796 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
|gene_alias=AW107670 | |gene_alias=AW107670 | ||
|gene_description=baculoviral IAP repeat-containing 3 | |gene_description=baculoviral IAP repeat-containing 3 | ||
|gene_name=Birc3 | |gene_name=Birc3 | ||
| Line 18: | Line 35: | ||
|species=mouse | |species=mouse | ||
|start=7870721 | |start=7870721 | ||
|start_of_center_position=7870728 | |||
|strand=+ | |strand=+ | ||
|tata_box="-9(TCCTTTATAAGT,-,0.00)" | |tata_box="-9(TCCTTTATAAGT,-,0.00)" | ||
Revision as of 20:56, 13 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2442 |
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| Nearest PromoterID: | NM_007464 |
| Entrez ID: | 11796 |
| Nearest Unigene: | Mm.2026 |
| Nearest Refseq: | NM_007464 |
| Nearest Ensembl: | ENSMUSG00000032000 |
| Gene Name: | Birc3 |
| Gene Alias: | AW107670 |
| Gene Description: | baculoviral IAP repeat-containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-9(TCCTTTATAAGT,-,0.00)" |