TSS: Hg 138272.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|NCRNA00346= | |||
|all_trans=AK307956:-128 ENST00000538077.2:-154 uc001vrk.3:-154 BX647632:-154 AL831965:-172 NR_027701:-211 AJ295981:-211 BC093904:263 BC104998:263 KJ901200:286 | |all_trans=AK307956:-128 ENST00000538077.2:-154 uc001vrk.3:-154 BX647632:-154 AL831965:-172 NR_027701:-211 AJ295981:-211 BC093904:263 BC104998:263 KJ901200:286 | ||
|chr=chr13 | |chr=chr13 | ||
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|distance_to_tss=221 | |distance_to_tss=221 | ||
|end=110870097 | |end=110870097 | ||
|end_of_center_position=110870088 | |||
|entrez_id=283487 | |entrez_id=283487 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
|gene_alias=C13orf29 | |gene_alias=C13orf29 | ||
|gene_description=long intergenic non-protein coding RNA 346 | |gene_description=long intergenic non-protein coding RNA 346 | ||
|gene_id=283487 | |gene_id=283487 | ||
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|species=human | |species=human | ||
|start=110870077 | |start=110870077 | ||
|start_of_center_position=110870087 | |||
|strand=- | |strand=- | ||
|transcript_name=AK307956 | |transcript_name=AK307956 | ||
Revision as of 21:24, 13 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 221 |
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| Nearest PromoterID: | NR_027701 |
| Entrez ID: | 283487 |
| Nearest Unigene: | Hs.245390 |
| Nearest Refseq: | NM_178514 |
| Nearest Ensembl: | ENSG00000255874 |
| Gene Name: | long intergenic non-protein coding RNA 346 |
| Gene Alias: | C13orf29 |
| Gene Description: | long intergenic non-protein coding RNA 346 |
| Gene Type: | ncRNA |
| CpG%: | 0.045 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.