TSS: Mm 78130.1: Difference between revisions

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(Created page with "{{TSSDetail |chr=chr9 |cpg_percent=0.005 |distance= |distance_to_tss=-1518 |end=20867135 |entrez_id=319278 |gc_percent=0.457711 |gene_alias=RyDEN |gene_description=RIKEN cDNA...")
 
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|distance_to_tss=-1518
|distance_to_tss=-1518
|end=20867135
|end=20867135
|end_of_center_position=20867124
|entrez_id=319278
|entrez_id=319278
|gc_percent=0.457711
|gc_percent=0.457711
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|species=mouse
|species=mouse
|start=20867112
|start=20867112
|start_of_center_position=20867123
|strand=+
|strand=+
|transcript_name=
|transcript_name=

Revision as of 21:29, 13 May 2019

Basic information about the TSS


TSS ID:mm_78130.1
Species:mouse
Chr:chr9
Start:20867112
End:20867135
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation


Transcript_name:
Distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:A230050P20Rik
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-1518
Nearest PromoterID:NM_175687
Entrez ID:319278
Nearest Unigene:Mm.249932
Nearest Refseq:NM_175687
Nearest Ensembl:ENSMUSG00000038884
Gene Name:A230050P20Rik
Gene Alias:RyDEN
Gene Description:RIKEN cDNA A230050P20 gene
Gene Type:protein-coding
CpG%:0.005
GC%:0.457711
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):