TSS: Mm 78208.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr9 |cpg_percent=0.01 |distance= |distance_to_tss=6195 |end=21490374 |entrez_id=387194 |gc_percent=0.422886 |gene_alias=Mirn199|Mirn199a-1|mir-199a-1 |gene_d...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Mirn199a-1= | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 5: | Line 6: | ||
|distance_to_tss=6195 | |distance_to_tss=6195 | ||
|end=21490374 | |end=21490374 | ||
|end_of_center_position=21490369 | |||
|entrez_id=387194 | |entrez_id=387194 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
|gene_alias=Mirn199 | |gene_alias=Mirn199 | ||
|gene_description=microRNA 199a-1 | |gene_description=microRNA 199a-1 | ||
|gene_name=Mir199a-1 | |gene_name=Mir199a-1 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|mir-199a-1= | |||
|nearest_ensembl=ENSMUSG00000065547 | |nearest_ensembl=ENSMUSG00000065547 | ||
|nearest_promoter_id=NR_029585 | |nearest_promoter_id=NR_029585 | ||
| Line 18: | Line 21: | ||
|species=mouse | |species=mouse | ||
|start=21490363 | |start=21490363 | ||
|start_of_center_position=21490368 | |||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
Revision as of 21:41, 13 May 2019
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 6195 |
|---|---|
| Nearest PromoterID: | NR_029585 |
| Entrez ID: | 387194 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_029585 |
| Nearest Ensembl: | ENSMUSG00000065547 |
| Gene Name: | Mir199a-1 |
| Gene Alias: | Mirn199 |
| Gene Description: | microRNA 199a-1 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |