TSS: Mm 78472.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr9 |cpg_percent=0.01 |distance= |distance_to_tss=-43536 |end=32652510 |entrez_id=23871 |gc_percent=0.477612 |gene_alias=AI196000|AI448617|D230050P06|Ets-1|T...") |
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{{TSSDetail | {{TSSDetail | ||
|AI448617= | |||
|D230050P06= | |||
|Ets-1= | |||
|Tpl1= | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 5: | Line 9: | ||
|distance_to_tss=-43536 | |distance_to_tss=-43536 | ||
|end=32652510 | |end=32652510 | ||
|end_of_center_position=32652507 | |||
|entrez_id=23871 | |entrez_id=23871 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
|gene_alias=AI196000 | |gene_alias=AI196000 | ||
|gene_description="E26 avian leukemia oncogene 1, 5' domain" | |gene_description="E26 avian leukemia oncogene 1, 5' domain" | ||
|gene_name=Ets1 | |gene_name=Ets1 | ||
| Line 18: | Line 23: | ||
|species=mouse | |species=mouse | ||
|start=32652502 | |start=32652502 | ||
|start_of_center_position=32652506 | |||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
| Line 23: | Line 29: | ||
|tss_id=mm_78472.1 | |tss_id=mm_78472.1 | ||
|tss_score=1 | |tss_score=1 | ||
|vs= | |||
}} | }} | ||
Revision as of 22:23, 13 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -43536 |
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| Nearest PromoterID: | NM_011808 |
| Entrez ID: | 23871 |
| Nearest Unigene: | Mm.292415 |
| Nearest Refseq: | NM_011808 |
| Nearest Ensembl: | ENSMUSG00000032035 |
| Gene Name: | Ets1 |
| Gene Alias: | AI196000 |
| Gene Description: | "E26 avian leukemia oncogene 1, 5' domain" |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |