TSS: Mm 78884.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr9 |cpg_percent=0.01 |distance= |distance_to_tss=-23194 |end=44581708 |entrez_id=13209 |gc_percent=0.517413 |gene_alias=1110001P04Rik|E230023J21Rik|HLR2|mRC...") |
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{{TSSDetail | {{TSSDetail | ||
|E230023J21Rik= | |||
|HLR2= | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 5: | Line 7: | ||
|distance_to_tss=-23194 | |distance_to_tss=-23194 | ||
|end=44581708 | |end=44581708 | ||
|end_of_center_position=44581699 | |||
|entrez_id=13209 | |entrez_id=13209 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
|gene_alias=1110001P04Rik | |gene_alias=1110001P04Rik | ||
|gene_description=DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 | |gene_description=DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 | ||
|gene_name=Ddx6 | |gene_name=Ddx6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|mRCK/P54= | |||
|nearest_ensembl=ENSMUSG00000032097 | |nearest_ensembl=ENSMUSG00000032097 | ||
|nearest_promoter_id=NM_001110826 | |nearest_promoter_id=NM_001110826 | ||
| Line 16: | Line 20: | ||
|nearest_unigene=Mm.267061 | |nearest_unigene=Mm.267061 | ||
|num_trans=0 | |num_trans=0 | ||
|p54= | |||
|rck= | |||
|species=mouse | |species=mouse | ||
|start=44581688 | |start=44581688 | ||
|start_of_center_position=44581698 | |||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
Revision as of 23:30, 13 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -23194 |
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| Nearest PromoterID: | NM_001110826 |
| Entrez ID: | 13209 |
| Nearest Unigene: | Mm.267061 |
| Nearest Refseq: | NM_007841 |
| Nearest Ensembl: | ENSMUSG00000032097 |
| Gene Name: | Ddx6 |
| Gene Alias: | 1110001P04Rik |
| Gene Description: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |