TSS: Mm 134942.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|9530039J15Rik= | |||
|CNT-B2= | |||
|Centb2= | |||
|all_trans=ENSMUST00000058033.7:0 NM_030138:0 uc007yxb.1:0 uc012aeh.1:0 uc007yxc.1:0 AK129041:0 AK147319:0 AK029343:0 AK020591:0 AK032916:0 AK044812:0 AB490692:160 | |all_trans=ENSMUST00000058033.7:0 NM_030138:0 uc007yxb.1:0 uc012aeh.1:0 uc007yxc.1:0 AK129041:0 AK147319:0 AK029343:0 AK020591:0 AK032916:0 AK044812:0 AB490692:160 | ||
|chr=chr16 | |chr=chr16 | ||
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|distance_to_tss=41 | |distance_to_tss=41 | ||
|end=31201243 | |end=31201243 | ||
|end_of_center_position=31201197 | |||
|entrez_id=78618 | |entrez_id=78618 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
|gene_alias=4832442G16 | |gene_alias=4832442G16 | ||
|gene_description="ArfGAP with coiled-coil, ankyrin repeat and PH domains 2" | |gene_description="ArfGAP with coiled-coil, ankyrin repeat and PH domains 2" | ||
|gene_id=78618 | |gene_id=78618 | ||
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|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1925868 | |hgnc_mgi_id=MGI:1925868 | ||
|mKIAA0041= | |||
|nearest_ensembl=ENSMUSG00000049076 | |nearest_ensembl=ENSMUSG00000049076 | ||
|nearest_promoter_id=NM_030138 | |nearest_promoter_id=NM_030138 | ||
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|species=mouse | |species=mouse | ||
|start=31201150 | |start=31201150 | ||
|start_of_center_position=31201196 | |||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000058033.7 NM_030138 uc007yxb.1 uc012aeh.1 uc007yxc.1 AK129041 AK147319 AK029343 AK020591 AK032916 AK044812 | |transcript_name=ENSMUST00000058033.7 NM_030138 uc007yxb.1 uc012aeh.1 uc007yxc.1 AK129041 AK147319 AK029343 AK020591 AK032916 AK044812 | ||
Revision as of 00:23, 14 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 41 |
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| Nearest PromoterID: | NM_030138 |
| Entrez ID: | 78618 |
| Nearest Unigene: | Mm.274646 |
| Nearest Refseq: | NM_030138 |
| Nearest Ensembl: | ENSMUSG00000049076 |
| Gene Name: | "ArfGAP with coiled-coil, ankyrin repeat and PH domains 2" |
| Gene Alias: | 4832442G16 |
| Gene Description: | "ArfGAP with coiled-coil, ankyrin repeat and PH domains 2" |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.