TSS: Mm 80493.1: Difference between revisions

Revision as of 03:35, 14 May 2019

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 5)

Gene and protein annotation

Transcript_name:	ENSMUST00000034896.12 ENSMUST00000148238.1 ENSMUST00000150850.1 NM_026658 uc009qul.2 uc009qum.2 AK019088 AK017573 AF369902 BC063256
Distance:	0
GeneID:	68291
HGNC/MGI_ID:	MGI:1915541
UniProt_ID:	D6RCK0 G5E889 Q923Z3

Gene_name:	mitochondrial tRNA translation optimization 1
Gene_symbol:	Mto1
Gene_synonyms:	2310039H01Rik 5730419A02Rik
Gene_source:	MGI:1915541

TATA-Box annotation

Distance to TSS:	0
Nearest PromoterID:	NM_026658
Entrez ID:	68291
Nearest Unigene:	Mm.291779
Nearest Refseq:	NM_026658
Nearest Ensembl:	ENSMUSG00000032342
Gene Name:	mitochondrial tRNA translation optimization 1
Gene Alias:	2310039H01Rik
Gene Description:	mitochondrial tRNA translation optimization 1
Gene Type:	protein-coding
CpG%:	0.105
GC%:	0.666667
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
+|5730419A02Rik=
 |all_trans=ENSMUST00000034896.12:0 ENSMUST00000148238.1:0 ENSMUST00000150850.1:0 NM_026658:0 uc009qul.2:0 uc009qum.2:0 AK019088:0 AK017573:0 AF369902:0 BC063256:0
 |chr=chr9
@@ Line 6: / Line 7: @@
 |distance_to_tss=0
 |end=78448228
+|end_of_center_position=78448211
 |entrez_id=68291
 |gc_percent=0.666667
-|gene_alias=2310039H01Rik|5730419A02Rik
+|gene_alias=2310039H01Rik
 |gene_description=mitochondrial tRNA translation optimization 1
 |gene_id=68291
@@ Line 24: / Line 26: @@
 |species=mouse
 |start=78448192
+|start_of_center_position=78448210
 |strand=+
 |transcript_name=ENSMUST00000034896.12 ENSMUST00000148238.1 ENSMUST00000150850.1 NM_026658 uc009qul.2 uc009qum.2 AK019088 AK017573 AF369902 BC063256