TSS: Mm 80989.1: Difference between revisions

Revision as of 04:59, 14 May 2019

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 5)

Gene and protein annotation

Gene_name:	topoisomerase (DNA) II binding protein 1
Gene_symbol:	Topbp1
Gene_synonyms:	1110031N14Rik 2810429C13Rik D430026L04Rik
Gene_source:	MGI:1920018

TATA-Box annotation

Distance to TSS:	-121
Nearest PromoterID:	NM_176979
Entrez ID:	235559
Nearest Unigene:	Mm.259893
Nearest Refseq:	NM_176979
Nearest Ensembl:	ENSMUSG00000032555
Gene Name:	topoisomerase (DNA) II binding protein 1
Gene Alias:	1110031N14Rik
Gene Description:	topoisomerase (DNA) II binding protein 1
Gene Type:	protein-coding
CpG%:	0.135
GC%:	0.731343
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
+|2810429C13Rik=
+|AI256758=
+|D430026L04Rik=
 |all_trans=ENSMUST00000035164.9:0 ENSMUST00000189631.1:0 AK085031:0 AK129104:0 AK084654:0 AK084869:0 NM_176979:72 uc009rgl.1:72 BC049797:72 ENSMUST00000187065.1:248
 |chr=chr9
@@ Line 6: / Line 9: @@
 |distance_to_tss=-121
 |end=103305255
+|end_of_center_position=103305206
 |entrez_id=235559
 |gc_percent=0.731343
-|gene_alias=1110031N14Rik|2810429C13Rik|AI256758|D430026L04Rik|mKIAA0259
+|gene_alias=1110031N14Rik
 |gene_description=topoisomerase (DNA) II binding protein 1
 |gene_id=235559
@@ Line 17: / Line 21: @@
 |gene_type=protein-coding
 |hgnc_mgi_id=MGI:1920018
+|mKIAA0259=
 |nearest_ensembl=ENSMUSG00000032555
 |nearest_promoter_id=NM_176979
@@ Line 24: / Line 29: @@
 |species=mouse
 |start=103305156
+|start_of_center_position=103305205
 |strand=+
 |transcript_name=ENSMUST00000035164.9 ENSMUST00000189631.1 AK085031 AK129104 AK084654 AK084869