TSS: Hg 144939.1: Difference between revisions

Revision as of 05:49, 14 May 2019

Basic information about the TSS

TSS ID:	hg_144939.1
Species:	human
Chr:	chr14

Start:	100376276
End:	100376348
Strand:	-

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 16)

Gene and protein annotation

Transcript_name:	ENST00000358655.8 ENST00000556504.5 ENST00000557722.5 ENST00000556435.5 ENST00000554331.5 ENST00000555063.5 ENST00000557239.5 ENST00000553524.5 ENST00000556579.5 ENST00000554772.5 ENST00000556783.5 ENST00000553413.5 ENST00000553769.6 ENST00000556209.5 ENST00000554605.5 ENST00000553581.1 NM_213645 NM_173701 uc001yhk.2 uc059fdm.1 uc059fdo.1 uc059fdq.1 uc059fds.1 uc059fdt.1 uc059fdw.1 uc059fdx.1 uc059fdz.1 uc059fea.1 uc059fec.1 uc059fed.1 uc059fef.1 uc059fek.1 uc059fel.1 uc059fes.1 BX248006 AK291141
Distance:	0
GeneID:	7453
HGNC/MGI_ID:	HGNC:12729
UniProt_ID:	G3V277 G3V313 G3V339 G3V3H8 G3V3P2 G3V3X0 G3V4A3 G3V4N8 G3V5H5 G3V5U1 G3V5W1 P23381

Gene_name:	tryptophanyl-tRNA synthetase
Gene_symbol:	WARS
Gene_synonyms:	IFP53
Gene_source:	HGNC:12729

TATA-Box annotation

Distance to TSS:	31
Nearest PromoterID:	NM_173701
Entrez ID:	7453
Nearest Unigene:	Hs.497599
Nearest Refseq:	NM_004184
Nearest Ensembl:	ENSG00000140105
Gene Name:	tryptophanyl-tRNA synthetase
Gene Alias:	GAMMA-2
Gene Description:	tryptophanyl-tRNA synthetase
Gene Type:	protein-coding
CpG%:	0.115
GC%:	0.706468
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
+|IFI53=
+|IFP53=
 |all_trans=ENST00000358655.8:0 ENST00000556504.5:0 ENST00000557722.5:0 ENST00000556435.5:0 ENST00000554331.5:0 ENST00000555063.5:0 ENST00000557239.5:0 ENST00000553524.5:0 ENST00000556579.5:0 ENST00000554772.5:0 ENST00000556783.5:0 ENST00000553413.5:0 ENST00000553769.6:0 ENST00000556209.5:0 ENST00000554605.5:0 ENST00000553581.1:0 NM_213645:0 NM_173701:0 uc001yhk.2:0 uc059fdm.1:0 uc059fdo.1:0 uc059fdq.1:0 uc059fds.1:0 uc059fdt.1:0 uc059fdw.1:0 uc059fdx.1:0 uc059fdz.1:0 uc059fea.1:0 uc059fec.1:0 uc059fed.1:0 uc059fef.1:0 uc059fek.1:0 uc059fel.1:0 uc059fes.1:0 BX248006:0 AK291141:0 ENST00000556645.5:26 uc059fdg.1:26 ENST00000355338.6:-457 uc001yhl.2:-457 AK056100:-457
 |chr=chr14
@@ Line 6: / Line 8: @@
 |distance_to_tss=31
 |end=100376348
+|end_of_center_position=100376313
 |entrez_id=7453
 |gc_percent=0.706468
-|gene_alias=GAMMA-2|IFI53|IFP53
+|gene_alias=GAMMA-2
 |gene_description=tryptophanyl-tRNA synthetase
 |gene_id=7453
@@ Line 24: / Line 27: @@
 |species=human
 |start=100376276
+|start_of_center_position=100376312
 |strand=-
 |transcript_name=ENST00000358655.8 ENST00000556504.5 ENST00000557722.5 ENST00000556435.5 ENST00000554331.5 ENST00000555063.5 ENST00000557239.5 ENST00000553524.5 ENST00000556579.5 ENST00000554772.5 ENST00000556783.5 ENST00000553413.5 ENST00000553769.6 ENST00000556209.5 ENST00000554605.5 ENST00000553581.1 NM_213645 NM_173701 uc001yhk.2 uc059fdm.1 uc059fdo.1 uc059fdq.1 uc059fds.1 uc059fdt.1 uc059fdw.1 uc059fdx.1 uc059fdz.1 uc059fea.1 uc059fec.1 uc059fed.1 uc059fef.1 uc059fek.1 uc059fel.1 uc059fes.1 BX248006 AK291141