TSS: Mm 155175.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_028375:-38 uc009tfd.1:-38 ENSMUST00000063384.3:54 AK013603:54 BC031701:56 uc033jpx.1:68 AK214233:287 |chr=chrX |cpg_percent=0.045 |distance=-38 |dist...") |
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{{TSSDetail | {{TSSDetail | ||
|Mar8.1= | |||
|Mart8a= | |||
|all_trans=NM_028375:-38 uc009tfd.1:-38 ENSMUST00000063384.3:54 AK013603:54 BC031701:56 uc033jpx.1:68 AK214233:287 | |all_trans=NM_028375:-38 uc009tfd.1:-38 ENSMUST00000063384.3:54 AK013603:54 BC031701:56 uc033jpx.1:68 AK214233:287 | ||
|chr=chrX | |chr=chrX | ||
| Line 6: | Line 8: | ||
|distance_to_tss=47 | |distance_to_tss=47 | ||
|end=53607978 | |end=53607978 | ||
|end_of_center_position=53607969 | |||
|entrez_id=72865 | |entrez_id=72865 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
|gene_alias=2900027G03Rik | |gene_alias=2900027G03Rik | ||
|gene_description=CAAX box 1C | |gene_description=CAAX box 1C | ||
|gene_id=72865 | |gene_id=72865 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=53607959 | |start=53607959 | ||
|start_of_center_position=53607968 | |||
|strand=+ | |strand=+ | ||
|transcript_name=NM_028375 uc009tfd.1 | |transcript_name=NM_028375 uc009tfd.1 | ||
Revision as of 09:53, 14 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 47 |
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| Nearest PromoterID: | NM_028375 |
| Entrez ID: | 72865 |
| Nearest Unigene: | Mm.158897 |
| Nearest Refseq: | NM_028375 |
| Nearest Ensembl: | ENSMUSG00000051851 |
| Gene Name: | CAAX box 1C |
| Gene Alias: | 2900027G03Rik |
| Gene Description: | CAAX box 1C |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.