TSS: Mm 155655.1: Difference between revisions

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(Created page with "{{TSSDetail |all_trans=AK154689:-341 ENSMUST00000113976.1:-352 AK155591:-352 NM_001163539:-433 uc009tsa.2:-433 |chr=chrX |cpg_percent=0.005 |distance=-341 |distance_to_tss=436...")
 
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Line 6: Line 6:
|distance_to_tss=436
|distance_to_tss=436
|end=85870713
|end=85870713
|end_of_center_position=85870710
|entrez_id=71398
|entrez_id=71398
|gc_percent=0.338308
|gc_percent=0.338308
Line 24: Line 25:
|species=mouse
|species=mouse
|start=85870705
|start=85870705
|start_of_center_position=85870709
|strand=+
|strand=+
|transcript_name=AK154689
|transcript_name=AK154689

Revision as of 10:59, 14 May 2019

Basic information about the TSS


TSS ID:mm_155655.1
Species:mouse
Chr:chrX
Start:85870705
End:85870713
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation


Transcript_name:AK154689
Distance:-341
GeneID:71398
HGNC/MGI_ID:MGI:1918648
UniProt_ID:
Gene_name:RIKEN cDNA 5430427O19 gene
Gene_symbol:5430427O19Rik
Gene_synonyms:
Gene_source:MGI:1918648



TATA-Box annotation


Distance to TSS:436
Nearest PromoterID:NM_001163539
Entrez ID:71398
Nearest Unigene:Mm.185296
Nearest Refseq:NM_001163539
Nearest Ensembl:ENSMUSG00000025058
Gene Name:RIKEN cDNA 5430427O19 gene
Gene Alias:-
Gene Description:RIKEN cDNA 5430427O19 gene
Gene Type:protein-coding
CpG%:0.005
GC%:0.338308
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.